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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
5
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
32
adipose tissue
32
fibroblast
27
adipocyte
22
pericyte cell
20
subcutaneous adipose tissue
19
foreskin fibroblast
19
mesenchymal stem cell
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
12
fibroblast of dermis
12
skin fibroblast
11
hepatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
7
pancreatic stellate cell
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
Adaptive / Maladaptive / Repairing Fibroblast
3
Fibroblast
3
Mesangial Cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pulmonary interstitial fibroblast
3
visceral abdominal adipose tissue
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
5
brain
5
connective tissue
5
vasculature
Life stage
2
adult
1
fetal
1
unknown
Date released
3
January, 2020
2
May, 2020
Software used
3
macs
2
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
differential activity
biosample_term_name!
Adaptive / Maladaptive / Repairing Fibroblast
Showing 5 of 5 results
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Download
FileSet
DSR631MKV
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR529VUE
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast adult DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR353QAR
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR663NVC
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608VUV
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast unknow from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP