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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
6
pancreatic beta cell
5
pancreatic alpha cell
4
pancreatic delta cell
3
pancreatic acinar cell
3
pancreatic ductal cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
conventional dendritic cell
2
endothelial cell
2
heart left ventricle
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
regulatory T cell
2
stellate neuron
1
adipocyte
1
ascending aorta
1
cardiac precursors
1
mesenchymal stem cell
1
pancreas
1
skeletal muscle satellite cell
1
thoracic aorta
Organ
3
epithelium
3
pancreas
Life stage
1
child
Date released
7
February, 2024
4
February, 2021
4
January, 2021
3
November, 2021
2
May, 2021
1
August, 2018
1
June, 2020
1
March, 2023
1
October, 2019
Software used
3
macs
2
cicero
Lab
4
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
4
T1D
1
AMP
RFA
4
T1D
1
AMP
annotation_type!
differential activity
Showing 5 of 5 results
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Download
FileSet
DSR946TIV
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of ductal
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR961ZKL
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of conventional_dendritic
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR780YWW
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of ductal
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR928RQE
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of conventional_dendritic
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR920WKD
released
Annotation file set
: Pancreatic ductal cell accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP