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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
128
monocyte
69
heart
64
stomach
62
HeLa-S3
57
A549
56
brain
56
kidney
52
H1-hESC
51
lung
50
muscle of arm
49
small intestine
48
adrenal gland
45
placenta
44
CD8-positive, alpha-beta T cell
44
muscle of leg
44
neural progenitor cell
41
large intestine
40
B cell
40
common myeloid progenitor, CD34-positive
39
left lung
39
liver
39
muscle of back
38
K562
37
endothelial cell
37
thymus
36
islet of Langerhans
35
retina
34
right lung
33
macrophage
32
fibroblast
32
hematopoietic multipotent progenitor cell
32
hepatocyte
32
right kidney
30
renal pelvis
29
renal cortex interstitium
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
adipose tissue
27
heart left ventricle
27
left kidney
26
smooth muscle cell
26
spinal cord
24
adipocyte
24
pericyte cell
24
regulatory T cell
24
spleen
23
T cell
22
tibial nerve
21
CD8-positive, alpha-beta memory T cell
20
T-helper 1 cell
20
body of pancreas
20
pigmented layer of retina
19
HFFc6
19
T-helper 17 cell
19
coronary artery
19
natural killer cell
18
EndoC_BH1
18
MCF-7
18
caudate nucleus
18
right atrium auricular region
18
trophoblast cell
17
mononuclear cell
17
pancreas
17
pancreatic ductal cell
17
psoas muscle
17
sigmoid colon
17
tibial artery
16
endothelial cell of hepatic sinusoid
16
heart right ventricle
16
ovary
15
T-helper 2 cell
15
astrocyte
15
frontal cortex
15
mesenchymal stem cell
15
thyroid gland
14
endothelial cell of umbilical vein
14
subcutaneous adipose tissue
13
GM12878
13
HepG2
13
ascending aorta
13
excitatory neuron
13
fibroblast of cardiac tissue
13
fibroblast of lung
13
gastrocnemius medialis
13
neutrophil
13
omental fat pad
13
pancreatic acinar cell
13
pancreatic beta cell
13
substantia nigra
13
transverse colon
12
cerebellum
12
chorionic villus
12
embryonic stem cell
12
endocrine pancreas
12
foreskin keratinocyte
12
mammary gland epithelial cell
12
muscle of trunk
12
retinal pigment epithelial cell
12
skeletal muscle satellite cell
11
Ammon's horn
11
aorta
11
erythroblast
11
fibroblast of dermis
11
keratinocyte
11
pancreatic alpha cell
11
putamen
11
skeletal muscle myoblast
11
testis
10
H9
10
Peyer's patch
10
foreskin fibroblast
10
left cardiac atrium
10
pancreatic delta cell
10
skeletal muscle tissue
9
kidney tubule cell
9
layer of hippocampus
9
osteoblast
9
skin fibroblast
9
upper lobe of left lung
8
SK-N-SH
8
chorion membrane
8
colon epithelial cell
8
hepatic stellate cell
8
immortal human breast epithelial cell line cell
8
lymphocyte
8
naive T cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
skeletal muscle fiber
8
temporal lobe
8
thoracic aorta
8
trophoblast
7
CD4-positive, alpha-beta T cell
7
NAMALWA cell
7
SK-N-DZ
7
angular gyrus
7
breast epithelium
7
cardiac muscle cell
7
cingulate gyrus
7
endometrium adenocarcinoma
7
esophagus
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
glomerular endothelial cell
7
limb
7
lymphoblastoid cell line
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
6
22Rv1
6
Brodmann (1909) area 46
6
CD4-positive helper T cell
6
GM19240
6
IMR-90
6
KARPAS-422 cell
6
LNCaP clone FGC
6
SGBS preadipocytes
6
T47D
6
amygdala
6
anterior cingulate cortex
6
bronchial epithelial cell
6
choroid plexus epithelial cell
6
colonic mucosa
6
glomerular visceral epithelial cell
6
kidney glomerular epithelial cell
6
left renal cortex interstitium
6
left renal pelvis
6
mast cell
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neurosphere
6
right lobe of liver
6
right renal pelvis
6
tongue
6
type I muscle cell
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BE(2)-C
5
BJ cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Caco-2 cell
5
GM06990
5
GM12864
5
GM12865
5
GM18507
5
GM19238
5
GM19239
5
H7-hESC
5
HAP-1
5
HCT116
5
HEK293
5
HL-60
5
HT-29
5
HUES8
5
LoVo cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
differential activity
files.file_type!
xls
month_released!
February, 2021
June, 2021
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP