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Citing CMDGA
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Annotation type
eQTL
2
pQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
quantitative proteomics
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
cartilage tissue
Organ
2
connective tissue
Life stage
2
adult
Date released
2
August, 2021
Software used
2527
macs
2372
r
1035
chromhmm
838
encode-ccres
244
abc
134
deltasvm
122
deseq2
31
cicero
27
chicago
27
nospecificsoft_customcode
23
gtex_finemapping_eQTL:caveman
23
gtex_finemapping_eQTL:caviar
23
gtex_finemapping_eQTL:dapg
22
seurat
17
samtools
14
hiccups
12
limix
11
deeptools
11
umitools
9
rasqual
9
salmon
5
eigenmt
5
qTLtools
3
matrix-eQTL
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
fastqtl
2
mpraflow
2
peer
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
cisgenome
1
e-range
1
pepatac
1
spp
Lab
2
ITG
Project
2
ITG
RFA
2
ITG
annotation_type!
eQTL
biosample_term_name!
C1 segment of cervical spinal cord
endothelial cell
Showing 2 of 2 results
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Download
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG