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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
71
brain
19
caudate nucleus
14
cerebellum
14
frontal cortex
14
layer of hippocampus
14
substantia nigra
13
temporal lobe
12
putamen
11
Ammon's horn
10
SK-N-DZ
10
angular gyrus
10
choroid plexus epithelial cell
9
SK-N-SH
8
SK-N-MC
8
cingulate gyrus
8
globus pallidus
8
midbrain
7
BE(2)-C
6
Brodmann (1909) area 46
6
Daoy
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
medulla oblongata
6
middle frontal gyrus
6
pons
5
cardiac fibroblast
5
A172
5
M059J
5
amygdala
5
brain microvascular endothelial cell
5
cerebellar cortex
5
cerebellum (Hemisphere)
5
hypothalamus
5
nucleus accumbens
4
H54
4
U-87 MG
4
anterior cingulate cortex
4
brain pericyte
4
inferior parietal cortex
4
medulloblastoma
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
prefrontal cortex
2
dorsolateral prefrontal cortex
2
hippocampal neuron
2
middle frontal area 46
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
eQTL
month_released!
August, 2017
May, 2021
Showing 1 of 1 results
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Download
FileSet
DSR416XCR
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP