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Citing CMDGA
Clear Filters
Annotation type
2
hQTL
eQTL
1
meQTL
1
sQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
2
ChIP-seq
1
DNA methylation profiling by array assay
1
RNA-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
monocyte
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
Life stage
4
adult
Date released
4
May, 2021
Software used
105
macs
15
r
4
limix
1
abc
1
chicago
1
cicero
1
minfi
1
sqtlseeker
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
eQTL
biosample_term_name!
eye
globus pallidus
Showing 4 of 4 results
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Download
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR650UBZ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP