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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
113
monocyte
85
stomach
84
heart
73
kidney
71
brain
67
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
61
adrenal gland
60
placenta
58
muscle of leg
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
48
liver
47
thymus
46
H1-hESC
45
CD8-positive, alpha-beta T cell
45
right lung
44
neural progenitor cell
42
hematopoietic multipotent progenitor cell
41
K562
40
right kidney
39
B cell
39
renal cortex interstitium
39
renal pelvis
38
retina
36
left kidney
35
spinal cord
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
heart left ventricle
31
islet of Langerhans
29
endothelial cell
28
adipose tissue
26
MCF-7
26
macrophage
25
fibroblast
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
adipocyte
22
foreskin keratinocyte
22
hepatocyte
22
pericyte cell
21
body of pancreas
21
smooth muscle cell
20
T cell
20
breast cancer cell
20
caudate nucleus
20
keratinocyte
20
mononuclear cell
20
natural killer cell
20
pancreas
20
pigmented layer of retina
20
psoas muscle
20
tibial nerve
19
foreskin fibroblast
19
ovary
18
HFFc6
18
gastrocnemius medialis
18
mesenchymal stem cell
18
pancreatic ductal cell
18
regulatory T cell
18
thyroid gland
17
HepG2
17
coronary artery
17
embryonic stem cell
17
endothelial cell of umbilical vein
17
heart right ventricle
17
muscle of trunk
16
GM12878
16
chorionic villus
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
layer of hippocampus
16
retinal pigment epithelial cell
16
substantia nigra
16
testis
16
upper lobe of left lung
15
astrocyte
15
cardiac muscle cell
15
omental fat pad
15
right atrium auricular region
15
skeletal muscle tissue
15
subcutaneous adipose tissue
14
EndoC_BH1
14
H9
14
endocrine pancreas
14
mammary gland epithelial cell
14
neutrophil
14
osteoblast
14
pancreatic beta cell
14
prostate gland
14
tibial artery
13
CD4-positive, alpha-beta T cell
13
Peyer's patch
13
ascending aorta
13
bronchial epithelial cell
13
cerebellum
13
neurosphere
13
putamen
13
skeletal muscle myoblast
12
T-helper 1 cell
12
T-helper 17 cell
12
aorta
12
excitatory neuron
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
pancreatic acinar cell
12
pancreatic alpha cell
11
Ammon's horn
11
T-helper 2 cell
11
breast epithelium
11
endothelial cell of hepatic sinusoid
11
epithelial cell of prostate
11
frontal cortex
11
pancreatic delta cell
11
skeletal muscle satellite cell
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
lymphocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
neuronal stem cell
10
right renal pelvis
10
skin fibroblast
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
erythroblast
9
esophagus
9
kidney tubule cell
9
left cardiac atrium
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal cortex interstitium
9
thoracic aorta
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
hepatic stellate cell
7
mature neutrophil
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
gene expression
variant allelic effects
month_released!
May, 2020
organ_slims!
large intestine
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP