Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
gene expression
1
variant allelic effects
Annotation Category
2
Target gene links
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
ChIP-seq
11
DNase-seq
1
HiC
1
pCHi-C
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
27
islet of Langerhans
25
retina
20
pigmented layer of retina
16
liver
13
subcutaneous adipose tissue
12
kidney
10
pancreas
10
right atrium auricular region
10
tibial nerve
9
adipose tissue
9
putamen
8
caudate nucleus
8
frontal cortex
8
heart
8
heart left ventricle
7
Ammon's horn
7
omental fat pad
6
ascending aorta
6
body of pancreas
6
cerebellum
6
stomach
6
substantia nigra
5
adrenal gland
5
amygdala
5
anterior cingulate cortex
5
brain
5
cerebellum (Hemisphere)
5
hypothalamus
5
nucleus accumbens
5
psoas muscle
5
spleen
4
C1 segment of cervical spinal cord
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
heart right ventricle
4
left ventricle myocardium
4
ovary
4
right lobe of liver
4
small intestine
4
thymus
3
globus pallidus
3
medulla oblongata
3
midbrain
3
muscle of leg
3
occipital lobe
3
placenta
3
pons
3
renal pelvis
3
sigmoid colon
3
skin of body
3
spinal cord
3
superior temporal gyrus
3
thyroid gland
3
transverse colon
3
uterus
2
hindlimb muscle
2
muscle of leg
2
aorta
2
blood
2
breast epithelium
2
cortex of kidney
2
dorsolateral prefrontal cortex
2
esophagus
2
esophagus muscularis mucosa
2
gastrocnemius medialis
2
large intestine
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
lung
2
middle frontal gyrus
2
muscle of arm
2
pancreatic ductal cell
2
pancreatic stellate cell
2
prostate gland
2
renal cortex interstitium
2
right kidney
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle tissue
2
testis
2
thoracic aorta
2
tissue
2
trophoblast
2
visceral abdominal adipose tissue
1
left kidney
1
omental fat pad
1
Pancreatic islets
1
Peyer's patch
1
Schwann cell
1
aorta wall
1
beige adipocyte
1
bladder (urinary bladder)
1
breast
1
cardiac ventricle
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebrospinal fluid
1
chorion membrane
1
colon sigmoid
1
cortex
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
endothelial cell
1
esophagus mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
inferior parietal cortex
1
layer of hippocampus
1
limb
1
minor salivary gland
1
muscle of trunk
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pituitary gland
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
renal cortex tubule
1
renal glomerulus
1
right cardiac atrium
1
right lung
1
skeletal muscle
1
synovial joint
1
tissue-resident macrophage
1
tongue
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
vagina
1
white adipose tissue
Organ
4
heart
Life stage
1
adult
1
fetal
Date released
2
March, 2020
1
January, 2020
1
May, 2020
Software used
1
deltasvm
1
hiccups
1
macs
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
gene expression
annotation_type_category!
ChIP-seq
organ_slims!
artery
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR366BAA
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart right ventricle DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254XKD
released
Annotation file set
: A target gene prediction annotation in heart right ventricle of DSR082IVJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492SZZ
released
Annotation file set
: A target gene prediction annotation in Human Right Ventricle of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512QRY
released
Annotation file set
: Accessible chromatin annotation of heart right ventricle from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP