Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
115
monocyte
47
CD8-positive, alpha-beta T cell
33
endothelial cell
32
fibroblast
29
macrophage
21
pericyte cell
21
smooth muscle cell
19
CD14-positive monocyte
18
hepatocyte
17
B cell
16
pancreatic ductal cell
15
CD4-positive, alpha-beta T cell
15
common myeloid progenitor, CD34-positive
14
endothelial cell of umbilical vein
14
pancreatic beta cell
13
astrocyte
13
foreskin fibroblast
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
natural killer cell
13
pancreatic acinar cell
13
pancreatic alpha cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
osteoblast
12
regulatory T cell
11
erythroblast
11
keratinocyte
11
pancreatic delta cell
10
T cell
9
mature neutrophil
9
neutrophil
9
skeletal muscle myoblast
8
glutamatergic neuron
8
mast cell
8
skeletal muscle satellite cell
7
T-helper 1 cell
7
cardiac muscle cell
7
endothelial cell of lymphatic vessel
7
fibroblast of lung
7
foreskin keratinocyte
7
retinal pigment epithelial cell
7
skeletal muscle fiber
7
type II pneumocyte
6
T-cell
6
bronchial epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
hepatic stellate cell
6
memory B cell
6
mesenchymal stem cell
6
myofibroblast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
trophoblast cell
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
CD4-positive, alpha-beta memory T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
adipocyte
5
alternatively activated macrophage
5
basal cell
5
endocardial cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
gabaergic neuron
5
inhibitory neuron
5
naive B cell
5
plasma cell
5
tracheal epithelial cell
4
CD1c-positive myeloid dendritic cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
blood vessel smooth muscle cell
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
enteric smooth muscle cell
4
epithelial cell of proximal tubule
4
glomerular endothelial cell
4
inflammatory macrophage
4
kidney glomerular epithelial cell
4
luminal epithelial cell of mammary gland
4
mammary gland epithelial cell
4
megakaryocyte
4
mesothelial cell
4
neuronal stem cell
4
neurosphere
4
pancreatic endothelial cell
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
renal epithelial cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
Ishikawa
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
blood cell
3
bone marrow cell
3
brain pericyte
3
ciliated cell
3
club cell
3
enteric neuron
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
erythroid cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
foreskin melanocyte
3
glomerular visceral epithelial cell
3
goblet cell
3
kidney epithelial cell
3
kidney tubule cell
3
microglial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive t cell
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic MUC5B+ductal cell
3
pancreatic alpha+beta cell
3
pancreatic cycling alpha cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
schwann cell
3
skeletal muscle cell
3
skin fibroblast
3
smooth muscle cell of the brain vasculature
3
thyroid follicular cell
3
type B pancreatic cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Adipose stromal cell
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Muller cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
annotation_type!
gene expression
month_released!
September, 2022
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
TSTSR295022
released
Annotation file set
: ChromHMM 13-state model for CD34-PB
Lab:
Stephen Parker, UMich
Project:
AMP