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Schema
Citing CMDGA
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Annotation type
2
eQTL
2
pQTL
1
histone modifications
Annotation Category
4
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
2
quantitative proteomics
1
ChIP-seq
Available data
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
35
fibroblast
29
adipose tissue
27
adipocyte
24
pericyte cell
19
foreskin fibroblast
18
mesenchymal stem cell
17
fibroblast of cardiac tissue
16
fibroblast of lung
16
omental fat pad
16
subcutaneous adipose tissue
15
osteoblast
12
fibroblast of dermis
12
skin fibroblast
11
hepatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
pancreatic stellate cell
7
GM23248
7
chondrocyte
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
HT1080
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Fibroblast
2
Mesangial Cell
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
mesangial cell
2
stromal cell
2
visceral abdominal adipose tissue
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
beige adipocyte
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
white adipose cell
1
white adipose tissue
Organ
5
connective tissue
Life stage
4
adult
Date released
4
August, 2021
1
February, 2021
Software used
4
fastqtl
4
peer
1
macs
Lab
4
ITG
1
AMP-T2D consortium
Project
4
ITG
1
AMP
RFA
4
ITG
1
AMP
annotation_type!
gene expression
organ_slims!
small intestine
Showing 5 of 5 results
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Download
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR957WSW
released
Annotation file set
: Histone modifications annotation for Bone Knee_cartilage from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP