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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
39
retina
20
pigmented layer of retina
16
retinal pigment epithelial cell
9
eye
8
WERI-Rb-1
5
fibroblast of the conjunctiva
5
iris pigment epithelial cell
2
Muller cell
1
retinal pigment epithelial cell
1
corneal epithelium
1
retinal bipolar neuron
1
retinal cell
Organ
5
epithelium
5
eye
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
gene expression
organ_slims!
intestine
thyroid gland
Showing 5 of 5 results
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Download
FileSet
DSR741HXN
released
Annotation file set
: Candidate regulatory elements for BSS00743 iris pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523WGB
released
Annotation file set
: Target gene predictions for BSS00743 iris pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR302XLF
released
Annotation file set
: Chromatin states for BSS00743 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR858CLJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iris pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR950BXJ
released
Annotation file set
: Accessible chromatin annotation for Others HIPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP