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Schema
Citing CMDGA
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Annotation type
gene expression
1
eQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
RNA-seq
Available data
bed bed3+
15
bigWig
1
tsv
File set status
1
released
Genome assembly (visualization)
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
18
A549
10
common myeloid progenitor, CD34-positive
9
hematopoietic multipotent progenitor cell
9
liver
8
body of pancreas
8
caudate nucleus
8
subcutaneous adipose tissue
8
tibial nerve
7
adipose tissue
7
ascending aorta
7
coronary artery
7
omental fat pad
7
tibial artery
6
B cell
6
K562
6
adrenal gland
6
cerebellum
6
frontal cortex
6
putamen
6
right atrium auricular region
6
substantia nigra
5
Ammon's horn
5
CD8-positive, alpha-beta memory T cell
5
MCF-7
5
mature neutrophil
5
mononuclear cell
5
right lobe of liver
5
stomach
4
C1 segment of cervical spinal cord
4
amygdala
4
angular gyrus
4
anterior cingulate cortex
4
aorta
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
hypothalamus
4
islet of Langerhans
4
left ventricle myocardium
4
nucleus accumbens
4
sigmoid colon
4
spleen
4
temporal lobe
4
thyroid gland
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta T cell
3
CD4-positive, alpha-beta memory T cell
3
HeLa-S3
3
Peyer's patch
3
T cell
3
cartilage tissue
3
endocrine pancreas
3
endometrium adenocarcinoma
3
heart left ventricle
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney
3
layer of hippocampus
3
monocyte
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
neutrophil
3
ovary
3
psoas muscle
3
right cardiac atrium
3
skeletal muscle tissue
3
thoracic aorta
3
upper lobe of left lung
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
Brodmann (1909) area 46
2
CD14-positive, CD16-negative classical monocyte
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
LNCaP clone FGC
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
T Cell
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
alternatively activated macrophage
2
articular chondrocyte
2
blood
2
breast epithelium
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
fibroblast of breast
2
globus pallidus
2
hepatic stellate cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
lower leg skin
2
mammary gland epithelial cell
2
medulla oblongata
2
mesenchymal stem cell
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
pancreas
2
parathyroid adenoma
2
pons
2
prostate gland
2
regulatory T cell
2
skeletal muscle satellite cell
2
small intestine
2
stomach smooth muscle
2
superior temporal gyrus
2
testis
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
C4-2B
1
COLO829
1
Caco-2 cell
1
Caki2
1
DOHH2
1
GM04503
1
GM04504
1
GM10248
1
GM10266
1
GM12875
1
GM12878
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
HAP-1
1
HCT116
1
HL-60
Organ
1
eye
Life stage
3
embryonic
1
adult
Date released
1
February, 2020
Software used
1
qTLtools
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
gene expression
files.file_type!
bed bed3+
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR010VOR
released
Annotation file set
: cis-eQTL of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP