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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
gene expression
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Biosample type
1
primary cell
Biosample term
115
monocyte
54
common myeloid progenitor, CD34-positive
47
CD8-positive, alpha-beta T cell
38
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
29
fibroblast
26
macrophage
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
pericyte cell
21
regulatory T cell
20
mononuclear cell
19
natural killer cell
19
smooth muscle cell
18
trophoblast cell
16
T-helper 1 cell
16
astrocyte
16
fibroblast of lung
16
foreskin fibroblast
15
CD4-positive, alpha-beta T cell
15
neutrophil
15
osteoblast
15
skeletal muscle myoblast
14
T-helper 17 cell
14
T-helper 2 cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
neurosphere
12
excitatory neuron
12
fibroblast of cardiac tissue
12
fibroblast of dermis
11
erythroblast
11
skeletal muscle satellite cell
9
mature neutrophil
9
naive T cell
9
skin fibroblast
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
hepatic stellate cell
7
CD1c-positive myeloid dendritic cell
7
cardiac muscle cell
7
skeletal muscle fiber
6
T-cell
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
foreskin melanocyte
6
memory B cell
6
mesenchymal stem cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
alternatively activated macrophage
5
basal cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gabaergic neuron
5
inhibitory neuron
5
mast cell
5
myofibroblast cell
5
naive B cell
5
plasma cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
astrocyte of the spinal cord
4
blood vessel smooth muscle cell
4
cardiac fibroblast
4
enteric smooth muscle cell
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
inflammatory macrophage
4
megakaryocyte
4
preadipocyte
4
renal epithelial cell
4
smooth muscle cell of the esophagus
4
stromal cell of bone marrow
3
Ishikawa
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
adipocyte
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
3
brain pericyte
3
ciliated cell
3
enteric neuron
3
erythroid cell
3
mammary epithelial cell
3
mammary stem cell
3
microglial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive t cell
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic MUC5B+ductal cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
3
schwann cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adipose stromal cell
2
B Cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Classical Dendritic Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Fibroblast
2
M2 Macrophage
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Muller cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
T Cell
2
Th2 cell
2
Vascular Smooth Muscle Cell / Pericyte
2
alveolar macrophage
2
articular chondrocyte
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
colon goblet cell
2
columnar chondrocyte
2
conventional dendritic cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
erythroid progenitor cell
2
extracellular matrix secreting cell
2
fat cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
head and neck squamous cell carcinoma
2
intestinal tuft cell
2
leukemic stem cell
2
leukocyte
2
luteal cell
2
mantle cell lymphoma cell
2
mature NK T cell
2
mature natural killer cell
2
melanocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
naive regulatory T cell
2
natural killer cell mediated cytotoxicity
2
neuron
2
neuronal stem cell
2
non-classical monocyte
2
pancreatic endocrine cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
regular atrial cardiac myocyte
2
renal proximal tubule cell
2
skeletal muscle fibroblast
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the coronary artery
2
somatic muscle myotube
2
stellate neuron
2
stromal cell
2
uterine smooth muscle cell
2
vascular associated smooth muscle cell
2
ventricular cardiac muscle cell
Date released
1
May, 2020
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
gene expression
biosample_term_name!
astrocyte of the cerebellum
organ_slims!
epithelium
Showing 1 of 1 results
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Download
FileSet
DSR761AFH
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal myeloid dendritic cell
Lab:
AMP-T2D consortium
Project:
AMP