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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
8
in vitro differentiated cells
4
primary cell
Biosample term
115
monocyte
54
common myeloid progenitor, CD34-positive
47
CD8-positive, alpha-beta T cell
41
B cell
33
endothelial cell
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
31
CD14-positive monocyte
29
macrophage
24
pericyte cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
natural killer cell
21
regulatory T cell
21
smooth muscle cell
20
hepatocyte
20
mononuclear cell
19
foreskin keratinocyte
18
endothelial cell of umbilical vein
18
trophoblast cell
17
keratinocyte
16
T-helper 1 cell
16
astrocyte
16
fibroblast of lung
16
foreskin fibroblast
16
pancreatic ductal cell
15
CD4-positive, alpha-beta T cell
15
neutrophil
15
osteoblast
15
pancreatic beta cell
15
skeletal muscle myoblast
14
T-helper 17 cell
14
T-helper 2 cell
14
pancreatic alpha cell
13
mammary epithelial cell
13
mammary gland epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
neurosphere
13
pancreatic acinar cell
13
pancreatic delta cell
12
bronchial epithelial cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
fibroblast of cardiac tissue
12
fibroblast of dermis
11
erythroblast
11
skeletal muscle satellite cell
10
dermis blood vessel endothelial cell
9
epithelial cell of prostate
9
mature neutrophil
9
naive T cell
9
retinal pigment epithelial cell
9
skin fibroblast
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
hepatic stellate cell
8
kidney tubule cell
8
mast cell
8
myoepithelial cell of mammary gland
7
CD1c-positive myeloid dendritic cell
7
endothelial cell of lymphatic vessel
7
luminal epithelial cell of mammary gland
7
pulmonary artery endothelial cell
7
skeletal muscle fiber
7
type II pneumocyte
6
T-cell
6
cardiac muscle cell
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
epithelial cell of proximal tubule
6
foreskin melanocyte
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
kidney glomerular epithelial cell
6
memory B cell
6
mesenchymal stem cell
6
myofibroblast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
renal cortical epithelial cell
6
type I muscle cell
6
type II muscle cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
adipocyte
5
alternatively activated macrophage
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
endocardial cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gabaergic neuron
5
inhibitory neuron
5
iris pigment epithelial cell
5
kidney epithelial cell
5
lung microvascular endothelial cell
5
naive B cell
5
non-pigmented ciliary epithelial cell
5
plasma cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
tracheal epithelial cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
blood vessel smooth muscle cell
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
enteric smooth muscle cell
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
inflammatory macrophage
4
kidney capillary endothelial cell
4
megakaryocyte
4
mesothelial cell
4
neuronal stem cell
4
pancreatic endothelial cell
4
pancreatic polypeptide-secreting cell
4
preadipocyte
renal epithelial cell
4
smooth muscle cell of the esophagus
4
stromal cell of bone marrow
4
type I pneumocyte
3
Ishikawa
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
3
ciliated cell
3
club cell
3
enteric neuron
3
epidermal melanocyte
3
epithelial cell of amnion
3
erythroid cell
3
goblet cell
3
mammary stem cell
3
microglial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive t cell
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic MUC5B+ductal cell
3
pancreatic alpha+beta cell
3
pancreatic cycling alpha cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
3
schwann cell
3
thyroid follicular cell
3
type B pancreatic cell
2
cardiac fibroblast
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Adipose stromal cell
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
Disease term
2
heart failure
Life stage
2
adult
Date released
2
February, 2021
2
May, 2024
Software used
2
macs
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
4
AMP
RFA
2
AMP
2
AMP2
annotation_type!
gene expression
biosample_term_name!
renal epithelial cell
month_released!
January, 2020
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR717VNX
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of neuronal stem cell derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR833BQX
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of neuronal stem cell derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR403ZTW
released
Annotation file set
: Histone modifications annotation for Neural Neural_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815PXS
released
Annotation file set
: Binding sites annotation for Neural Neural_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP