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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
87
heart
85
stomach
74
kidney
72
brain
67
lung
67
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
61
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
48
liver
48
thymus
46
H1-hESC
45
right lung
43
neural progenitor cell
42
hematopoietic multipotent progenitor cell
42
right kidney
41
K562
40
renal cortex interstitium
40
renal pelvis
39
retina
36
left kidney
35
spinal cord
33
heart left ventricle
33
islet of Langerhans
33
spleen
29
adipose tissue
26
MCF-7
23
sigmoid colon
23
tibial nerve
22
body of pancreas
22
pancreas
21
caudate nucleus
20
adipocyte
20
breast cancer cell
20
pigmented layer of retina
20
psoas muscle
19
HFFc6
19
coronary artery
19
ovary
18
gastrocnemius medialis
18
heart right ventricle
18
thyroid gland
18
transverse colon
17
HepG2
17
embryonic stem cell
17
muscle of trunk
17
right atrium auricular region
17
tibial artery
16
GM12878
16
H9
16
chorionic villus
16
layer of hippocampus
16
subcutaneous adipose tissue
16
substantia nigra
16
testis
16
upper lobe of left lung
15
EndoC_BH1
15
omental fat pad
15
skeletal muscle tissue
14
ascending aorta
14
endocrine pancreas
14
prostate gland
14
putamen
13
Peyer's patch
13
cerebellum
12
aorta
12
frontal cortex
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
11
Ammon's horn
11
breast epithelium
11
cardiac muscle cell
11
left renal pelvis
11
right renal pelvis
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
pituitary stalk
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
neuronal stem cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
chondrocyte
6
hESC cell
6
iPSC derived cell line
6
induced pluripotent stem cell
6
mesodermal cell
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
neuroblastoma cell line
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
Caki2
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
5
H4
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
L1-S8
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
gene expression
biosample_type!
primary cell
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP