Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 384 results

FileSet
DSR102339
released
Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR553091
released
Annotation file set: The dataset contains differentially expressed genes between CAD and control in human skeletal muscle, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR215161
released
Annotation file set: The dataset contains cCRE–target gene links in human skeletal muscle, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR171881
released
Annotation file set: The dataset contains candidate cis-regulatory elements (cCREs) in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR443SJJ
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR820CRJ
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR906CZN
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR489AMO
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR871NXS
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2a muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR059OPJ
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2x muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR152USV
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 1 muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR034VMG
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - skeletal muscle satellite cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR601SXD
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2x muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR214AXM
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2a muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR658YGC
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 1 muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR139CQC
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - skeletal muscle satellite cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR188IVK
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2x muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR004IED
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 2a muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR117BGM
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - type 1 muscle cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR788TTL
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - skeletal muscle satellite cell
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR712UEE
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR198EWK
released
Annotation file set: Binding sites annotation for myotube (HSMMtube) for GOLDENPATH ENCODE DCC
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR422YSS
released
Annotation file set: Candidate regulatory elements for BSS01660 stomach smooth muscle from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR424EOF
released
Annotation file set: Candidate regulatory elements for BSS01659 stomach smooth muscle from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR387NRR
released
Annotation file set: Candidate regulatory elements for BSS01581 skeletal muscle tissue from EpiMap
Lab: AMP-T2D consortium
Project: AMP