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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
24
retina
20
pigmented layer of retina
19
monocyte
18
endothelial cell
17
fibroblast
14
neural progenitor cell
13
excitatory neuron
13
macrophage
12
endothelial cell of hepatic sinusoid
11
kidney
10
pancreatic ductal cell
10
retinal pigment epithelial cell
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
hepatocyte
9
pericyte cell
9
smooth muscle cell
8
astrocyte
8
pancreatic beta cell
adipocyte
7
fibroblast cell line
7
melanoma
7
osteoblast
7
pancreatic acinar cell
7
pancreatic alpha cell
6
SGBS preadipocytes
6
T cell
6
chondrocyte
6
glutamatergic neuron
6
heart
6
islet of Langerhans
6
keratinocyte
6
pancreas
5
B cell
5
erythroblast
5
fibroblast of cardiac tissue
5
inhibitory neuron
5
liver
5
pancreatic delta cell
5
prostate cancer cell line
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
acute myeloid leukemia
4
cardiac muscle cell
4
dermal fibroblast
4
glioblastoma multiforme cancer stem cell
4
hepatic stellate cell
4
mammary epithelial cell
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
neuroblastoma cell
4
neuronal stem cell
4
pancreatic stellate cell
4
regulatory T cell
4
skin fibroblast
3
cardiac fibroblast
3
CD8-positive, alpha-beta T cell
3
HepG2
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-cell acute lymphoblastic leukemia
3
Th1 cell
Tumor-derived cell line
3
adipose tissue
3
adipose-derived stem cell
3
aortic endothelial cell
3
brain
3
bronchial epithelial cell
3
choroid plexus epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
diffuse intrinsic pontine glioma
3
enterocyte
3
erythroid cell
3
foreskin fibroblast
3
gabaergic neuron
3
glial cell
3
glomerular visceral epithelial cell
3
heart left ventricle
3
liposarcoma
3
lung fibroblast cell line
3
lymphoblastoid cell line
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
primordial germ cell
3
prostate gland
3
right atrium auricular region
3
spinal cord
3
spleen
3
stomach
3
synovial sarcoma cell
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
3
triple-negative breast cancer
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
COLO-829 cell
2
COLO205
2
Caco-2 cell
2
D341 Med cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12878
2
GM13976
2
GM13977
2
GM19240
2
GM20000
2
GM23248
2
GP5d
2
H1-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES8
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
KBM-7
2
Kasumi-1
2
L-1236 cell
2
L-428 cell
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rhabdomyosarcoma
2
SAEC
2
SJSA1
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUDHL5
2
SUM-185PE cell
2
SW480
2
Saos-2 cell
2
T-47D cell
2
T-lymphocyte
Organ
2
blood
2
bodily fluid
Date released
1
February, 2021
1
June, 2020
Software used
12
r
8
chromhmm
2
macs
1
abc
1
encode-ccres
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
histone modifications
biosample_term_name!
Tumor-derived cell line
adipocyte
Showing 2 of 2 results
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Download
FileSet
DSR044RQC
released
Annotation file set
: Binding sites annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP