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Schema
Citing CMDGA
Clear Filters
Annotation type
histone modifications
1
accessible chromatin
1
binding sites
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
23
retina
20
pigmented layer of retina
19
monocyte
18
endothelial cell
17
fibroblast
14
neural progenitor cell
13
excitatory neuron
13
macrophage
12
endothelial cell of hepatic sinusoid
10
pancreatic ductal cell
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
kidney
9
pericyte cell
9
retinal pigment epithelial cell
9
smooth muscle cell
8
astrocyte
8
hepatocyte
8
pancreatic beta cell
7
adipocyte
7
fibroblast cell line
7
melanoma
7
osteoblast
7
pancreatic acinar cell
7
pancreatic alpha cell
6
T cell
6
chondrocyte
6
glutamatergic neuron
6
islet of Langerhans
6
keratinocyte
5
B cell
5
erythroblast
5
fibroblast of cardiac tissue
5
inhibitory neuron
5
liver
5
pancreatic delta cell
5
prostate cancer cell line
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
SGBS preadipocytes
4
acute myeloid leukemia
4
dermal fibroblast
4
glioblastoma multiforme cancer stem cell
4
heart
4
mammary epithelial cell
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
neuroblastoma cell
4
neuronal stem cell
4
pancreas
4
pancreatic stellate cell
4
regulatory T cell
4
skin fibroblast
3
CD8-positive, alpha-beta T cell
3
HepG2
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-cell acute lymphoblastic leukemia
3
Th1 cell
3
Tumor-derived cell line
3
adipose-derived stem cell
3
aortic endothelial cell
3
bronchial epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
diffuse intrinsic pontine glioma
3
enterocyte
3
erythroid cell
3
foreskin fibroblast
3
gabaergic neuron
3
glial cell
3
hepatic stellate cell
3
liposarcoma
3
lung fibroblast cell line
3
lymphoblastoid cell line
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
primordial germ cell
3
prostate gland
3
spinal cord
3
spleen
3
stomach
3
synovial sarcoma cell
3
tracheal epithelial cell
3
triple-negative breast cancer
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
COLO-829 cell
2
COLO205
2
Caco-2 cell
2
D341 Med cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12878
2
GM13976
2
GM13977
2
GM19240
2
GM20000
2
GM23248
2
GP5d
2
H1-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES8
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
KBM-7
2
Kasumi-1
2
L-1236 cell
2
L-428 cell
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rhabdomyosarcoma
2
SAEC
2
SJSA1
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUDHL5
2
SUM-185PE cell
2
SW480
2
Saos-2 cell
2
T-47D cell
2
T-lymphocyte
2
Th17 cell
2
Th2 cell
2
U-266 cell
2
U-87 MG
2
U2OS
2
U937
2
WERI-Rb-1
2
WI-38 cell
2
ZR-75-1 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adult acute myeloid leukemia
Organ
2
brain
Date released
1
February, 2021
January, 2020
1
June, 2020
Software used
33
r
17
chromhmm
13
encode-ccres
2
macs
2
qTLtools
1
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
histone modifications
biosample_term_name!
psoas muscle
month_released!
January, 2020
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR133CLX
released
Annotation file set
: Binding sites annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP