Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
41
common myeloid progenitor, CD34-positive
30
B cell
29
endothelial cell
27
CD14-positive monocyte
27
fibroblast
23
CD4-positive, alpha-beta memory T cell
23
monocyte
21
pericyte cell
19
macrophage
19
smooth muscle cell
16
CD8-positive, alpha-beta T cell
16
T cell
15
CD8-positive, alpha-beta memory T cell
15
endothelial cell of umbilical vein
15
foreskin keratinocyte
15
hepatocyte
15
regulatory T cell
14
astrocyte
14
mononuclear cell
14
natural killer cell
13
fibroblast of lung
13
foreskin fibroblast
13
keratinocyte
13
trophoblast cell
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
osteoblast
12
pancreatic beta cell
11
pancreatic alpha cell
11
skeletal muscle myoblast
10
T-helper 17 cell
10
T-helper 2 cell
10
mammary epithelial cell
10
mammary gland epithelial cell
10
neurosphere
10
pancreatic delta cell
10
pancreatic ductal cell
9
bronchial epithelial cell
9
erythroblast
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
neutrophil
9
pancreatic acinar cell
9
skeletal muscle satellite cell
8
dermis blood vessel endothelial cell
8
glutamatergic neuron
8
retinal pigment epithelial cell
7
cardiac muscle cell
7
epithelial cell of prostate
7
kidney tubule cell
7
skeletal muscle fiber
7
skin fibroblast
7
type II pneumocyte
6
T-cell
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
epithelial cell of proximal tubule
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
luminal epithelial cell of mammary gland
6
memory B cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
olfactory receptor cell
6
renal cortical epithelial cell
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
CD1c-positive myeloid dendritic cell
5
CD4-positive helper T cell
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
epithelial cell of esophagus
5
foreskin melanocyte
5
gabaergic neuron
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
hepatic stellate cell
5
inhibitory neuron
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
mesenchymal stem cell
5
myofibroblast cell
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
peripheral blood mononuclear cell
5
pulmonary artery endothelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
4
blood vessel smooth muscle cell
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
dermis lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
fibroblast of peridontal ligament
4
fibroblast of the aortic adventitia
4
iris pigment epithelial cell
4
lung microvascular endothelial cell
4
mast cell
4
megakaryocyte
4
mesothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic polypeptide-secreting cell
4
plasma cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
aortic adventitial fibroblast
3
aortic endothelial cell
3
astrocyte of the spinal cord
3
brain pericyte
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
fibroblast of gingiva
3
fibroblast of the conjunctiva
3
goblet cell
3
kidney capillary endothelial cell
3
naive t cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic stellate cell
3
parietal cell
3
peptic cell
3
plasmacytoid dendritic cell
3
renal epithelial cell
3
schwann cell
3
stromal cell of bone marrow
3
thyroid follicular cell
3
tracheal epithelial cell
3
type B pancreatic cell
2
Ishikawa
2
Muller cell
2
Schwann cell
2
T follicular helper cell
2
Th1 cell
2
Th17 cell
2
Th2 cell
2
activated CD8-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
alveolar macrophage
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
basal cell of epidermis
2
bone marrow cell
2
capillary endothelial cell
2
cardiac endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
colon goblet cell
2
conventional dendritic cell
2
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epidermal melanocyte
2
epithelial cell of amnion
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
gamma-delta T cell
2
glial cell
2
granular cell of epidermis
2
intestinal tuft cell
2
leukocyte
2
luteal cell
2
mammary stem cell
2
mature NK T cell
2
mature natural killer cell
2
melanocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
microglial cell
2
mononuclear cell of bone marrow
2
myoepithelial cell
2
myotube
2
naive regulatory T cell
2
natural killer cell mediated cytotoxicity
2
neoplastic cell
2
neuron
2
non keratinizing barrier epithelial cell
2
non-classical monocyte
2
paneth cell
2
peripheral blood stem cell
2
peripheral blood-derived erythroblast
Organ
1
lung
Date released
1
April, 2020
Lab
1
Xin Sun, UCSD
Project
1
LungMap
RFA
1
LungMap2
annotation_type!
histone modifications
organ_slims!
placenta
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR653IAP
released
Annotation file set
: ATAC-seq peaks in arterial from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap