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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
65
stomach
64
heart
57
kidney
51
brain
50
lung
50
muscle of arm
47
small intestine
46
adrenal gland
45
placenta
43
large intestine
43
muscle of leg
41
muscle of back
39
left lung
37
thymus
34
retina
34
right lung
32
liver
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
left kidney
26
spleen
23
spinal cord
22
heart left ventricle
20
pigmented layer of retina
19
adipose tissue
18
pancreas
18
sigmoid colon
16
psoas muscle
15
islet of Langerhans
15
ovary
14
gastrocnemius medialis
14
thyroid gland
14
transverse colon
13
body of pancreas
13
muscle of trunk
13
testis
13
upper lobe of left lung
12
caudate nucleus
12
chorionic villus
12
heart right ventricle
12
layer of hippocampus
12
tibial nerve
11
Peyer's patch
11
endocrine pancreas
11
prostate gland
10
coronary artery
10
skeletal muscle tissue
9
breast epithelium
9
esophagus squamous epithelium
9
left cardiac atrium
9
left renal cortex interstitium
9
left renal pelvis
9
omental fat pad
9
right renal pelvis
9
substantia nigra
9
temporal lobe
9
trophoblast
8
aorta
8
colonic mucosa
8
esophagus muscularis mucosa
8
lower leg skin
8
right atrium auricular region
8
right renal cortex interstitium
8
tibial artery
7
ascending aorta
7
cerebellum
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
esophagus
7
eye
7
mucosa of rectum
7
parathyroid adenoma
7
stomach smooth muscle
7
thoracic aorta
7
tongue
6
Ammon's horn
6
angular gyrus
6
frontal cortex
6
gastroesophageal sphincter
6
globus pallidus
6
limb
6
midbrain
6
muscle layer of colon
6
muscle layer of duodenum
6
putamen
6
subcutaneous abdominal adipose tissue
6
subcutaneous adipose tissue
6
urinary bladder
6
uterus
6
vagina
5
occipital lobe
5
superior temporal gyrus
5
umbilical cord
4
Brodmann (1909) area 46
4
cerebellar cortex
4
medulla oblongata
4
middle frontal gyrus
4
pons
4
right cardiac atrium
3
amnion
3
cortex of kidney
3
embryonic facial prominence
3
femur
3
germinal matrix
3
inferior parietal cortex
3
mucosa of stomach
3
prefrontal cortex
3
rectum smooth muscle tissue
3
right lobe of liver
3
suprapubic skin
2
arm bone
2
breast carcinoma
2
chorion
2
endometrium cancer
2
first pancreatic bud
2
forelimb muscle
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
2
skin of body
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
hindlimb muscle
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Schwann cell
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder (urinary bladder)
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cartilage tissue
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulvinar nucleus
1
raphe nuclei
Organ
3
extraembryonic component
Life stage
3
embryonic
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
pQTL
variant allelic effects
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR419OOH
released
Annotation file set
: Candidate regulatory elements for BSS00074 amnion from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR070RBK
released
Annotation file set
: Target gene predictions for BSS00074 amnion from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR896FWW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE amnion
Lab:
AMP-T2D consortium
Project:
AMP