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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
39
A549
common myeloid progenitor, CD34-positive
26
hematopoietic multipotent progenitor cell
22
retina
20
pigmented layer of retina
19
CD8-positive, alpha-beta T cell
19
adrenal gland
19
liver
18
adipose tissue
18
monocyte
17
B cell
17
stomach
16
epithelial cell of proximal tubule
16
spleen
14
MCF-7
14
body of pancreas
13
K562
13
glomerular endothelial cell
13
islet of Langerhans
12
gastrocnemius medialis
12
sigmoid colon
12
subcutaneous adipose tissue
12
thyroid gland
12
tibial nerve
12
transverse colon
11
natural killer cell
10
CD8-positive, alpha-beta memory T cell
10
Peyer's patch
10
T-helper 1 cell
10
caudate nucleus
10
heart left ventricle
10
mononuclear cell
10
omental fat pad
10
ovary
10
regulatory T cell
10
upper lobe of left lung
9
CD14-positive monocyte
9
endocrine pancreas
9
layer of hippocampus
9
pancreas
9
psoas muscle
8
CD4-positive, alpha-beta T cell
8
HeLa-S3
8
endothelial cell
8
esophagus squamous epithelium
8
hepatocyte
8
lower leg skin
8
substantia nigra
7
aorta
7
ascending aorta
7
breast epithelium
7
esophagus muscularis mucosa
7
kidney loop of Henle thin ascending limb epithelial cell
7
parathyroid adenoma
7
right atrium auricular region
7
skeletal muscle tissue
7
temporal lobe
7
testis
7
vagina
6
CD4-positive, alpha-beta memory T cell
6
T cell
6
angular gyrus
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
duodenal mucosa
6
endometrium adenocarcinoma
6
esophagus
6
fibroblast of breast
6
gastroesophageal sphincter
6
immortal human breast epithelial cell line cell
6
kidney
6
kidney tubule cell
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
prostate gland
6
small intestine
6
stomach smooth muscle
6
thoracic aorta
6
tibial artery
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
LNCaP clone FGC
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T-helper 2 cell
5
T47D
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
frontal cortex
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney glomerular epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
lung
5
mature neutrophil
5
neutrophil
5
putamen
5
subcutaneous abdominal adipose tissue
5
uterus
4
Ammon's horn
4
Brodmann (1909) area 46
4
GM12878
4
T-helper 17 cell
4
adipocyte
4
bone tissue
4
dermis blood vessel endothelial cell
4
fibroblast of lung
4
globus pallidus
4
glutamatergic neuron
4
heart right ventricle
4
hepatic stellate cell
4
inflammatory macrophage
4
kidney connecting tubule epithelial cell
4
kidney interstitial cell
4
mammary gland epithelial cell
4
middle frontal gyrus
4
muscle cell
4
naive T cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
4
peripheral blood mononuclear cell
4
right lobe of liver
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
3
A172
3
ACC112
3
ACHN
3
C4-2B
3
Caki2
3
Cycling Mononuclear Phagocyte
3
DOHH2
3
GM04503
3
GM04504
3
GM23248
3
GM23338
3
H4
3
H54
3
HAP-1
3
HCT116
3
HL-60
3
HS-27A
3
HS-5
3
HT-29
3
HT1080
Organ
3
heart
Life stage
52
embryonic
3
adult
3
fetal
2
child
1
young adult
Date released
2
September, 2022
1
February, 2021
Software used
3
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
pQTL
assembly!
GRCh38
biosample_term_name!
common myeloid progenitor, CD34-positive
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR853SVT
released
Annotation file set
: Candidate regulatory elements for BSS00514 heart from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR144ZJD
released
Annotation file set
: Target gene predictions for BSS00514 heart from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384FIT
released
Annotation file set
: Gene expression of heart (atria and ventricle)
Lab:
AMP-T2D consortium
Project:
AMP