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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
128
monocyte
53
common myeloid progenitor, CD34-positive
43
CD8-positive, alpha-beta T cell
35
B cell
32
CD4-positive, alpha-beta memory T cell
26
regulatory T cell
23
T-helper 1 cell
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
20
T-helper 17 cell
20
glomerular endothelial cell
20
mononuclear cell
19
foreskin keratinocyte
19
hepatocyte
17
T-helper 2 cell
17
trophoblast cell
16
CD14-positive monocyte
16
natural killer cell
16
osteoblast
15
foreskin fibroblast
15
neutrophil
15
skeletal muscle myoblast
14
T cell
14
fibroblast of lung
13
CD4-positive, alpha-beta T cell
13
neurosphere
12
bronchial epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
11
fibroblast of dermis
11
mammary epithelial cell
10
endothelial cell
10
glomerular visceral epithelial cell
10
keratinocyte
10
kidney tubule cell
10
macrophage
10
mammary gland epithelial cell
9
fibroblast of cardiac tissue
9
mature neutrophil
9
naive T cell
9
retinal pigment epithelial cell
8
epithelial cell of prostate
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of villous mesenchyme
8
hepatic stellate cell
8
kidney glomerular epithelial cell
8
myoepithelial cell of mammary gland
8
renal cortical epithelial cell
7
CD1c-positive myeloid dendritic cell
7
astrocyte
7
kidney epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
pancreatic ductal cell
7
skeletal muscle satellite cell
7
skin fibroblast
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
foreskin melanocyte
6
gamma-delta T cell
6
kidney interstitial cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
5
CD14-positive, CD16-negative classical monocyte
5
T follicular helper cell
5
alternatively activated macrophage
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
fibroblast of peridontal ligament
5
iris pigment epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
non-pigmented ciliary epithelial cell
5
pancreatic beta cell
5
tracheal epithelial cell
4
T-cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte of the spinal cord
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
epithelial cell of esophagus
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
glutamatergic neuron
4
inflammatory macrophage
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
naive B cell
4
nephron progenitor
4
pancreatic alpha cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
stromal cell of bone marrow
3
Ishikawa
3
S-shaped body
3
Th1 cell
3
Th17 cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
3
brain pericyte
3
cardiac fibroblast
3
epidermal melanocyte
3
epithelial cell of amnion
3
erythroid cell
3
fibroblast
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
luminal epithelial cell of mammary gland
3
mammary stem cell
3
mast cell
3
mesenchymal stem cell
3
meso-epithelial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cel
3
naive regulatory T cell
3
neoplastic cell
3
pancreatic acinar cell
3
pancreatic delta cell
3
pericyte cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD4-positive, CD25-positive, alpha-beta regulatory T cell
2
Kupffer cell
2
Rhabdoid Tumor of the Kidney
2
Th2 cell
2
activated CD4-positive, alpha-beta T cell
2
cardiac muscle myoblast
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
effector memory CD4-positive, alpha-beta T cell
2
erythroid progenitor cell
2
head and neck squamous cell carcinoma
2
kidney inner medulla collecting duct intercalated cell
2
leukemic stem cell
2
leukocyte
2
mantle cell lymphoma cell
2
myeloid dendritic cell
2
neuronal stem cell
2
pancreatic polypeptide-secreting cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
renal vesicle
2
small cell ovarian carcinoma cell
2
somatic muscle myotube
1
retinal pigment epithelial cell
1
B-1a B cell
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Schwann cell
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
acute myeloid leukemia
1
alpha-beta T cell
1
alveolar cell type II
1
amniotic epithelial cell
1
bone cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
colorectal cancer
1
cytotoxic T cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic stem cell
1
epithelial cell of distal tubule
Organ
1
gonad
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
pQTL
organ_slims!
vasculature
Showing 1 of 1 results
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Download
FileSet
DSR547ORX
released
Annotation file set
: Accessible chromatin annotation for Gonad Gonad somatic cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP