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Annotation type
3
eQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
3
RNA-seq
File set status
3
released
Genome assembly (visualization)
3
hg18
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
1
liver
1
omental fat pad
1
subcutaneous adipose tissue
Organ
2
adipose tissue
2
connective tissue
1
liver
Life stage
3
adult
Date released
3
August, 2021
Software used
2546
macs
2385
r
1035
chromhmm
838
encode-ccres
250
abc
146
qTLtools
136
deltasvm
133
deseq2
32
cicero
27
chicago
27
nospecificsoft_customcode
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
18
samtools
15
limix
14
hiccups
14
matrix-eQTL
12
deeptools
12
umitools
11
rasqual
9
salmon
6
eigenmt
6
fastqtl
5
unknown
3
mach2qtl
3
minfi
3
peer
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
3
AMP-T2D consortium
Project
3
AMP
Collection Tags
3
AMP
3
T2DKP
RFA
3
AMP
annotation_type!
pQTL
Showing 3 of 3 results
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FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR767ENC
released
Annotation file set
: eQTLS in different tissues: omental fat (741 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR606JYM
released
Annotation file set
: eQTLS in different tissues: liver (960 samples)
Lab:
AMP-T2D consortium
Project:
AMP