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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
4
endothelial cell
3
hepatocyte
2
kidney distal convoluted tubule epithelial cell
2
renal principal cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
T-helper 17 cell
1
alternatively activated macrophage
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
natural killer cell
1
progenitor cell
1
proximal tubule cells with injury markers
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
Life stage
1
adult
Date released
1
August, 2021
Software used
1
macs
Lab
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
annotation_type!
representative DNase hypersensitivity sites
biosample_term_name!
epithelial cell of proximal tubule
Showing 1 of 1 results
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Download
FileSet
DSR299ZMD
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Injured PT (Havcr1)
Lab:
Katalin Susztak, Upenn
Project:
AMP