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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
target gene predictions
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
6
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
22
A549
10
MCF-7
8
K562
7
H9
5
HeLa-S3
5
SK-N-DZ
5
WI38
4
22Rv1
4
HEK293
4
SK-N-SH
3
A172
3
ACHN
3
CMK
3
Caki2
3
Daoy
3
GM04503
3
GM04504
3
GM06990
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12878
3
GM23248
3
H4
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
HepG2
3
IMR-90
3
KBM-7
3
L1-S8
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-3
3
PC-9
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
SJCRH30
3
SJSA1
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
2
A673
2
ACC112
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
C4-2B
2
Caco-2 cell
2
DND-41
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM03348
2
GM08714
2
GM12875
2
GM13976
2
GM13977
2
GM18507
2
GM19240
2
GM20000
2
GM23338
2
H1-hESC
2
H54
2
H7-hESC
2
HCT116
2
HS-27A
2
HS-5
2
HT1080
2
HUES48
2
HUES64
2
HuH-7
2
KARPAS-422 cell
2
KMS-11
2
KOPT-K1
2
L1-S8R
2
LoVo cell
2
Loucy
2
NAMALWA
2
NB4
2
NCI-H226 cell
2
NCI-H929
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY3
2
Panc1
2
RKO
2
RWPE2
2
Rh-4 cell
2
SK-MEL-5
2
SU-DHL-6
2
UCSF-4
2
fibroblast of cardiac tissue
2
glomerular visceral epithelial cell
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
1
786-O cell
1
8988T
1
A-673 cell
1
AG04449
1
AG04450
1
AG08395 cell
1
AG09309
1
AG09319
1
AG20443
1
BE2C
1
BJ
1
COLO-829 cell
1
COLO205
1
COLO829
1
CWRU1
1
Caco-2
1
D341 Med cell
1
D721Med
1
DG-75 cell
1
ECC-1
1
ES-I3
1
G-401 cell
1
GM12801
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GP5d
1
H1
1
H7
1
HAC cell
1
HBMEC cell
1
HCEC 1CT
1
HCT-116 cell
1
HEK293T
1
HFF-Myc
1
HGF
1
HK-2
1
HK-2 cell
1
HPDE6-E6E7
1
HTR-8/Svneo
1
HUES8
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7.5
1
HuTu-80 cell
1
Ishikawa
1
Jurkat
1
Jurkat, Clone E6-1
1
Karpas-422
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
LoVo
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MOLM-13 cell
1
Myoblasts
1
NB-4 cell
1
NCCIT cell
1
NCI-H226
1
NCI-H460
1
NCI-H460 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2/D1
1
Normal Human Astrocytes
1
OCI-AML3
1
PA-TU-8988T cell
1
PANC-1 cell
1
RCC
1
REH cell
Organ
3
lymph node
Life stage
2
adult
Date released
1
February, 2021
1
June, 2020
1
September, 2022
Software used
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
target gene predictions
Showing 3 of 3 results
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Download
FileSet
DSR677EVG
released
Annotation file set
: Candidate regulatory elements for BSS01274 MM.1S from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002PIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MM.1S
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR718HIX
released
Annotation file set
: Accessible chromatin annotation for Blood MM.1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP