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Schema
Citing CMDGA
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Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
25
A549
21
EndoC_BH1
20
breast cancer cell
15
MCF-7
13
H1-hESC
12
K562
12
neuroblastoma cell
11
gastric cancer cell
10
Rhabdomyosarcoma
9
liposarcoma
8
HepG2
8
diffuse intrinsic pontine glioma
8
fibroblast cell line
7
B-lymphoblastoid cell line
7
GM12878
7
H9
7
HEK293
7
induced pluripotent stem cell
7
melanoma
7
squamous cell lung carcinoma
6
22Rv1
6
GM06990
6
GM12864
6
GM12865
6
HL-60
6
HeLa-S3
6
IMR-90
6
Rh-4 cell
6
SK-N-DZ
6
SK-N-MC
6
WERI-Rb-1
6
acute myeloid leukemia
6
glioblastoma multiforme cancer stem cell
6
hESC cell
6
lymphoblastoid cell line
6
prostate cancer cell line
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BE(2)-C
5
BJ cell
5
CMK
5
Caco-2 cell
5
Chondroid Chordoma
5
Ewing sarcoma
5
GM12875
5
GM19240
5
GM23248
5
HAP-1
5
HT-29
5
Jurkat
5
KARPAS-422 cell
5
LHCN-M2
5
LNCAP
5
MG63
5
MM.1S
5
NAMALWA cell
5
NT2-D1 cell
5
OCI-LY7
5
PC-3
5
PC-9
5
RPMI8226
5
RS4-11 cell
5
RWPE1
5
SK-N-SH
5
SW480
5
WI38
5
dermal fibroblast
5
esophageal adenocarcinoma
5
esophageal squamous cell carcinoma
5
fibroblast of cardiac tissue
5
glioblastoma cell
5
melanoma cell
5
osteosarcoma
5
synovial sarcoma cell
5
triple-negative breast cancer
4
COLO205
4
Daoy
4
GM08714
4
GM10248
4
GM10266
4
GM12873
4
GM12891
4
GM12892
4
GM19238
4
GM19239
4
HAC cell
4
HBMEC cell
4
HCT-116 cell
4
HS-SY-2 cell
4
HUES6
4
HuH-7
4
KBM-7
4
LoVo cell
4
Mantle cell lymphoma
4
NHEK
4
Normal Human Astrocytes
4
OCI-LY1
4
PANC-1 cell
4
RKO
4
SAEC
4
SJSA1
4
SK-N-SH_RA
4
T-47D cell
4
Tumor-derived cell line
4
U-266 cell
4
U-87 MG
4
U2OS
4
WI-38 cell
4
cardiac muscle cell
4
esophageal epithelial cell
4
glioma cell
4
immortal neural cell line cell
4
keratinocyte
4
lung fibroblast cell line
4
metastatic melanoma
4
neural progenitor cell
4
pancreatic cell line
4
spinal cord
3
786-O cell
3
A-673 cell
3
A172
3
ACHN
3
COLO-320 cell
3
Caki2
3
D341 Med cell
3
DND-41 cell
3
ECC-1
3
G-401 cell
3
GM04503
3
GM04504
3
GM10847
3
GM12801
3
GM12872
3
GM12874
3
GM13976
3
GM13977
3
GM18505
3
GM18507
3
GM18526
3
GM18951
3
GM19099
3
GM19193
3
GM20000
3
H4
3
H7-hESC
3
HEK293-T-REx cell
3
HK-2 cell
3
HUES64
3
HeLa cell
3
Kasumi-1
3
L1-S8
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MCF10A-Er-Src cell
3
MDA-MB-231 cell
3
MOLM-13 cell
3
Myoblasts
3
NB-4 cell
3
NB4
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
OCI-AML3
3
OCI-LY3
3
PA-TU-8988T cell
3
RCC 7860
3
REH cell
3
RPMI7951
3
Raji cell
3
SH-SY5Y cell
3
SJCRH30
3
SK-MEL-5
3
SUDHL5
3
Saos-2 cell
3
T47D
3
U937
3
VCaP cell
3
Z-138
3
ZR-75-1 cell
3
cardiac myocyte cell derived cell line
3
choroid plexus epithelial cell
3
colon cancer cell line
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
epithelial ovarian cancer cell
3
hESC H9
3
hematopoietic cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
macrophage
3
multiple myeloma cell line
3
prostate derived cell line
3
renal proximal tubule epithelial cell
3
smooth muscle cell of the coronary artery
Life stage
1
unknown
Date released
2
February, 2021
1
September, 2022
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
target gene predictions
assembly!
GRCh38
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR237ZUA
released
Annotation file set
: Candidate regulatory elements for BSS00701 HK-2 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR721HNV
released
Annotation file set
: Histone modifications annotation for Kidney HK-2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180MBP
released
Annotation file set
: Binding sites annotation for Kidney HK-2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP