Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
32
primary cell
1
in vitro differentiated cells
1
tissue
Biosample term
68
heart
65
kidney
65
stomach
55
brain
51
lung
50
muscle of arm
46
small intestine
45
adrenal gland
45
placenta
43
islet of Langerhans
43
muscle of leg
42
large intestine
41
muscle of back
39
left lung
38
liver
36
retina
34
right lung
34
thymus
32
right kidney
30
renal cortex interstitium
30
renal pelvis
27
left kidney
26
spleen
25
heart left ventricle
23
adipose tissue
23
spinal cord
21
tibial nerve
20
pigmented layer of retina
19
subcutaneous adipose tissue
18
body of pancreas
17
caudate nucleus
16
coronary artery
16
sigmoid colon
15
ovary
15
pancreas
15
right atrium auricular region
15
substantia nigra
15
testis
15
tibial artery
14
thyroid gland
14
transverse colon
13
ascending aorta
13
cerebellum
13
gastrocnemius medialis
13
heart right ventricle
13
layer of hippocampus
13
omental fat pad
13
skeletal muscle tissue
13
upper lobe of left lung
12
chorionic villus
12
frontal cortex
12
muscle of trunk
12
prostate gland
12
psoas muscle
12
putamen
12
temporal lobe
11
Peyer's patch
11
endocrine pancreas
10
left cardiac atrium
10
left renal cortex interstitium
9
esophagus muscularis mucosa
9
esophagus squamous epithelium
9
left renal pelvis
9
right renal cortex interstitium
9
right renal pelvis
9
thoracic aorta
8
Ammon's horn
8
angular gyrus
8
breast epithelium
8
colonic mucosa
8
lower leg skin
8
trophoblast
8
vagina
7
aorta
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
esophagus
7
eye
7
midbrain
7
mucosa of rectum
7
parathyroid adenoma
7
right lobe of liver
7
stomach smooth muscle
7
tongue
7
uterus
6
amygdala
6
gastroesophageal sphincter
6
globus pallidus
6
hypothalamus
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
nucleus accumbens
6
occipital lobe
6
subcutaneous abdominal adipose tissue
6
urinary bladder
5
anterior cingulate cortex
5
cartilage tissue
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
medulla oblongata
5
right cardiac atrium
5
skin of body
5
superior temporal gyrus
5
umbilical cord
4
Brodmann (1909) area 46
4
C1 segment of cervical spinal cord
4
bone tissue
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
germinal matrix
4
middle frontal gyrus
4
pons
4
visceral abdominal adipose tissue
3
amnion
3
cerebellar cortex
3
embryonic facial prominence
3
femur
3
inferior parietal cortex
3
mucosa of stomach
3
prefrontal cortex
3
rectum smooth muscle tissue
3
suprapubic skin
2
muscle of leg
2
arm bone
2
blood
2
breast carcinoma
2
chorion
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
bladder
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
forelimb muscle
1
frontal pole
1
glomerular epithelium
1
gyrus rectus
Organ
1
epithelium
Date released
1
February, 2024
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
target gene predictions
assembly!
hg18
month_released!
January, 2020
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP