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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
27
neural progenitor cell
10
hematopoietic multipotent progenitor cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adipocyte
2
cardiac muscle cell
2
endodermal cell
2
mesenchymal stem cell
2
muscle cell
1
bipolar neuron
1
cardiac mesoderm primordium
1
cardiac precursors
1
ectodermal cell
1
excitatory neuron
1
hepatocyte
1
hippocampal neuron
1
islet precursor cell
1
lower motor neuron
1
mesendoderm
1
mesodermal cell
1
neural cell
1
neuron
1
olfactory neurosphere cell line
1
smooth muscle cell
1
trophoblast cell
Life stage
1
embryonic
Date released
1
January, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
target gene predictions
Showing 2 of 2 results
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Download
FileSet
DSR313BZF
released
Annotation file set
: Chromatin states for BSS00171 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR433PLX
released
Annotation file set
: Cardiomyocytes (cardiac muscle cell) accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP