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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
18
foreskin keratinocyte
16
foreskin fibroblast
16
keratinocyte
9
skin fibroblast
8
dermis blood vessel endothelial cell
8
fibroblast of dermis
8
lower leg skin
6
GM23248
6
dermis lymphatic vessel endothelial cell
5
iPS DF 4.7 Cell Line
4
RPMI7951
4
SK-MEL-5
4
dermis microvascular lymphatic vessel endothelial cell
3
iPS DF 19.11
3
iPS DF 19.7
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
3
suprapubic skin
2
COLO829
2
epidermal melanocyte
2
skin of body
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
basal cell of epidermis
1
fibroblast of skin of abdomen
1
granular cell of epidermis
1
iPS DF 4.7
Organ
3
skin of body
2
limb
1
epithelium
Date released
2
February, 2021
1
November, 2021
Software used
3
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
annotation_type!
target gene predictions
Showing 3 of 3 results
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Download
FileSet
DSR894JTL
released
Annotation file set
: Accessible chromatin annotation of Basal Epidermal (Skin) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR517SOO
released
Annotation file set
: Histone modifications annotation for Epidermis Forearm_skin from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR939JKO
released
Annotation file set
: Binding sites annotation for Epidermis Forearm_skin from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP