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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
differential activity
target gene predictions
1
accessible chromatin
1
gene expression
Annotation Category
4
Gene expression levels
1
cis-regulatory elements
Annotation type Category
4
scRNA-seq
1
snATAC-seq
Available data
4
tsv
1
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
15
endothelial cell
15
kidney
14
endothelial cell of hepatic sinusoid
12
hepatocyte
11
fibroblast
9
adipocyte
9
smooth muscle cell
8
macrophage
8
pancreatic ductal cell
7
pancreatic acinar cell
7
pancreatic stellate cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
skeletal muscle fiber
5
left cardiac atrium
5
pancreatic endothelial cell
4
mast cell
4
mesenchymal stem cell
4
myofibroblast cell
4
natural killer cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
type I muscle cell
4
type II muscle cell
3
B cell
3
Schwann cell
3
T cell
3
endothelial cell of lymphatic vessel
3
enterocyte
3
islet of Langerhans
3
liver
3
pancreatic quiescent stellate cell
3
subcutaneous adipose tissue
2
ESC derived cell line
2
basal cell
2
dendritic cell
2
endocardial cell
2
epithelial cell of esophagus
2
glial cell
2
goblet cell
2
keratinocyte
2
kidney distal convoluted tubule epithelial cell
2
leukocyte
2
neural cell
2
neuronal stem cell
2
pancreatic polypeptide-secreting cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
renal principal cell
2
skeletal muscle satellite cell
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-2 B cell
1
CD34-PB
1
CD8-positive, alpha-beta T cell
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
Pancreatic islets
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Satellite Cells, Skeletal Muscle
1
T-helper 17 cell
1
alternatively activated macrophage
1
bronchial goblet cell
1
cardiac muscle cell
1
caudate nucleus
1
cholangiocyte
1
cingulate gyrus
1
colonic mucosa
1
cortical cell of adrenal gland
1
duodenal mucosa
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
erythrocyte
1
fibroblast of lung
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
layer of hippocampus
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mesothelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
neuron cell of Hypothalamus (neuron)
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endocrine cell
1
pancreatic immune cell
1
parietal cell
1
peptic cell
1
proximal tubule cells with injury markers
1
rectum smooth muscle tissue
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
substantia nigra
1
temporal lobe
1
thyroid follicular cell
1
tissue-resident macrophage
1
type B pancreatic cell
1
type II pneumocyte
Organ
5
epithelium
4
blood vessel
4
liver
4
vasculature
Life stage
1
adult
Date released
4
March, 2023
1
February, 2024
Software used
4
r
1
macs
Lab
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
annotation_type!
target gene predictions
lab.title!
AMP-T2D consortium
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR230XXF
released
Annotation file set
: Differential activity within endothelial in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR481EVB
released
Annotation file set
: Differential activity within endothelial in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR721CKF
released
Annotation file set
: Differential activity within endothelial in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR000FZK
released
Annotation file set
: Gene expression annotation of pancreatic endothelial from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR441AVJ
released
Annotation file set
: pancreatic endothelial cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP