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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
histone modifications
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
5
bed bed3+
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
128
monocyte
51
kidney
49
heart
46
CD8-positive, alpha-beta T cell
46
stomach
44
islet of Langerhans
neural progenitor cell
39
brain
35
lung
35
muscle of arm
34
endothelial cell
34
retina
31
adrenal gland
31
hepatocyte
31
liver
31
placenta
31
small intestine
29
muscle of leg
28
large intestine
28
macrophage
27
common myeloid progenitor, CD34-positive
27
fibroblast
27
muscle of back
26
B cell
26
left lung
25
A549
23
hematopoietic multipotent progenitor cell
23
right lung
22
EndoC_BH1
22
pancreatic ductal cell
22
renal cortex interstitium
22
renal pelvis
22
right kidney
22
thymus
21
epithelial cell of proximal tubule
21
subcutaneous adipose tissue
20
breast cancer cell
20
pigmented layer of retina
20
regulatory T cell
20
spinal cord
19
glomerular endothelial cell
19
heart left ventricle
19
spleen
18
adipocyte
18
left kidney
17
T-helper 1 cell
17
adipose tissue
16
caudate nucleus
16
endothelial cell of hepatic sinusoid
16
smooth muscle cell
16
tibial nerve
15
body of pancreas
15
induced pluripotent stem cell
15
pancreas
15
pancreatic beta cell
15
right atrium auricular region
14
CD4-positive, alpha-beta memory T cell
14
MCF-7
14
T cell
14
T-helper 17 cell
14
cardiac muscle cell
14
coronary artery
14
foreskin fibroblast
14
foreskin keratinocyte
14
keratinocyte
14
natural killer cell
14
pancreatic acinar cell
14
retinal pigment epithelial cell
14
substantia nigra
13
H1-hESC
13
excitatory neuron
13
omental fat pad
13
osteoblast
13
pancreatic alpha cell
12
CD4-positive, alpha-beta T cell
12
HepG2
12
K562
12
embryonic stem cell
12
frontal cortex
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
12
putamen
12
tibial artery
11
astrocyte
11
endothelial cell of umbilical vein
11
mammary epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
pericyte cell
11
skeletal muscle myoblast
10
Rhabdomyosarcoma
10
cerebellum
10
gastric cancer cell
10
ovary
10
pancreatic delta cell
10
progenitor cell of endocrine pancreas
10
sigmoid colon
10
testis
10
trophoblast cell
10
upper lobe of left lung
9
Ammon's horn
9
ascending aorta
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
fibroblast of cardiac tissue
9
glomerular visceral epithelial cell
9
liposarcoma
9
neuronal stem cell
9
neutrophil
9
prostate gland
9
skeletal muscle tissue
9
thyroid gland
9
transverse colon
8
CD14-positive monocyte
8
CD8-positive, alpha-beta memory T cell
8
T-helper 2 cell
8
bronchial epithelial cell
8
layer of hippocampus
8
left cardiac atrium
8
pancreatic stellate cell
8
psoas muscle
8
skeletal muscle fiber
8
skeletal muscle satellite cell
7
B-lymphoblastoid cell line
7
amygdala
7
chorionic villus
7
choroid plexus epithelial cell
7
erythroblast
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
fibroblast cell line
7
fibroblast of lung
7
gastrocnemius medialis
7
heart right ventricle
7
hepatic stellate cell
7
mammary gland epithelial cell
7
mature neutrophil
7
mononuclear cell
7
right renal pelvis
6
22Rv1
6
Chondroid Chordoma
6
GM12865
6
GM12878
6
H9
6
HEK293
6
HeLa-S3
6
Peyer's patch
6
anterior cingulate cortex
6
chondrocyte
6
hESC cell
6
hypothalamus
6
left renal cortex interstitium
6
left renal pelvis
6
neuroblastoma cell line
6
neurosphere
6
nucleus accumbens
6
temporal lobe
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
BE(2)-C
5
BJ cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
CD4-positive helper T cell
5
CMK
5
Caco-2 cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
Organ
5
musculature of body
Life stage
2
adult
Date released
3
February, 2021
1
June, 2020
1
September, 2022
Software used
3
macs
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
target gene predictions
biosample_term_name!
neural progenitor cell
files.file_type!
bed bed9
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR417GJT
released
Annotation file set
: Candidate regulatory elements for BSS01155 LHCN-M2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR004NTA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LHCN-M2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837UGK
released
Annotation file set
: Histone modifications annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR864KBV
released
Annotation file set
: Binding sites annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513VRE
released
Annotation file set
: Accessible chromatin annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP