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Schema
Citing CMDGA
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Annotation type
1
eQTL
1
histone modifications
target gene predictions
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
66
heart
60
kidney
57
brain
51
muscle of arm
48
stomach
46
lung
45
placenta
44
muscle of leg
42
large intestine
41
muscle of back
40
small intestine
39
left lung
34
right lung
34
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
islet of Langerhans
27
left kidney
26
adrenal gland
23
spinal cord
20
liver
15
heart left ventricle
14
retina
12
chorionic villus
12
muscle of trunk
11
heart right ventricle
11
left cardiac atrium
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
10
spleen
9
right renal cortex interstitium
8
testis
8
trophoblast
7
chorion membrane
7
eye
7
tongue
6
adipose tissue
6
coronary artery
6
limb
6
pancreas
6
prostate gland
6
skeletal muscle tissue
5
ovary
5
right atrium auricular region
5
skin of body
5
tibial artery
5
umbilical cord
4
caudate nucleus
4
cortex of kidney
4
frontal cortex
4
germinal matrix
4
layer of hippocampus
4
occipital lobe
4
psoas muscle
4
putamen
4
sigmoid colon
4
subcutaneous adipose tissue
4
substantia nigra
4
tibial nerve
3
amnion
3
cerebellum
3
embryonic facial prominence
3
femur
3
midbrain
3
prefrontal cortex
3
temporal lobe
3
upper lobe of left lung
3
urinary bladder
2
hindlimb muscle
2
muscle of leg
2
amygdala
2
arm bone
2
breast carcinoma
2
chorion
2
colonic mucosa
2
endocrine pancreas
2
endometrium cancer
2
esophagus muscularis mucosa
2
first pancreatic bud
2
forelimb muscle
2
germinal center
2
globus pallidus
2
hypothalamus
2
kidney epithelium
2
leg bone
2
mammary gland
2
nucleus accumbens
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
superior temporal gyrus
2
thoracic aorta
2
thyroid gland
2
tissue
2
transverse colon
2
uterus
1
left kidney
1
omental fat pad
1
Ammon's horn
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Peyer's patch
1
Schwann cell
1
abdominal aorta artery
1
anterior cingulate cortex
1
anterior parahippocampal gyrus
1
aorta
1
aortic valve
1
arcuate nucleus of hypothalamus
1
ascending aorta
1
bed nucleus of stria terminalis
1
body of pancreas
1
breast
1
breast epithelium
1
caput epididymis
1
cardiogenic mesoderm
1
cartilage tissue
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cingulate gyrus
1
circle of Willis
1
claustrum of brain
1
colon
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
duodenal mucosa
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus
1
esophagus mucosa
1
esophagus squamous epithelium
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastrocnemius medialis
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
inferior parietal cortex
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
minor salivary gland
1
mitral valve
1
morula
1
mucosa of rectum
1
myelencephalon
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
parietal lobe
1
pineal body
1
piriform cortex
1
pons
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
pulvinar nucleus
1
raphe nuclei
1
rectum smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
right arm bone
1
right cardiac atrium
Organ
1
brain
1
esophagus
Life stage
adult
Date released
1
February, 2021
1
January, 2022
Software used
1
macs
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
target gene predictions
relevant_life_stage!
adult
Showing 2 of 2 results
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Download
FileSet
DSR591WDD
released
Annotation file set
: esophagus gej eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR261JUK
released
Annotation file set
: Histone modifications annotation for Neural Myelencephalon_nuclei from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP