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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
32
endothelial cell
30
hepatocyte
22
epithelial cell of proximal tubule
20
glomerular endothelial cell
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
pancreatic ductal cell
15
foreskin keratinocyte
15
pancreatic beta cell
14
pancreatic alpha cell
13
pancreatic acinar cell
12
keratinocyte
12
pancreatic delta cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
9
mammary epithelial cell
9
mammary gland epithelial cell
9
retinal pigment epithelial cell
8
dermis blood vessel endothelial cell
8
kidney tubule cell
7
kidney glomerular epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
renal cortical epithelial cell
6
choroid plexus epithelial cell
6
enterocyte
6
epithelial cell of prostate
6
kidney epithelial cell
6
myoepithelial cell of mammary gland
6
pulmonary artery endothelial cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Transitional Principal-Intercalated Cell
5
epithelial cell of esophagus
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
pancreatic endothelial cell
5
pancreatic polypeptide-secreting cell
5
tracheal epithelial cell
5
type II pneumocyte
4
aortic endothelial cell
4
brain microvascular endothelial cell
4
cortical cell of adrenal gland
4
dermis lymphatic vessel endothelial cell
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
kidney connecting tubule epithelial cell
4
luminal epithelial cell of mammary gland
4
lung microvascular endothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
3
S-shaped body
3
colon epithelial cell
3
endothelial cell of lymphatic vessel
3
goblet cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
meso-epithelial cell
3
mesothelial cell
3
type I pneumocyte
2
capillary endothelial cell
2
cholangiocyte
2
club cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
endothelial cell of coronary artery
2
epidermal melanocyte
2
epithelial cell of amnion
2
kidney inner medulla collecting duct intercalated cell
2
parietal cell
2
peptic cell
2
renal principal cell
2
renal vesicle
2
thyroid follicular cell
2
ureteric bud
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
basal cell of epidermis
1
bronchial goblet cell
1
cardiac endothelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
eccrine cell
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of distal tubule
1
foveolar cell of stomach
1
gastric goblet cell
1
granular cell of epidermis
1
granulosa cell
1
intestinal epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
myoepithelial cell
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
paneth cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
Organ
1
epithelium
0
adrenal gland
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
annotation_type!
target gene predictions
Showing 1 of 1 results
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Download
FileSet
DSR858VQN
released
Annotation file set
: Accessible chromatin annotation of Airway Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE