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Schema
Citing CMDGA
Clear Filters
Annotation type
4
gene expression
Annotation Category
4
Gene expression levels
Annotation type Category
3
snDropSeq
1
scRNA-seq
Available data
4
tsv
4
txt
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
45
CD8-positive, alpha-beta T cell
41
common myeloid progenitor, CD34-positive
27
CD14-positive monocyte
27
monocyte
26
B cell
23
CD4-positive, alpha-beta memory T cell
21
regulatory T cell
20
epithelial cell of proximal tubule
19
endothelial cell
18
glomerular endothelial cell
17
T-helper 1 cell
16
natural killer cell
15
CD8-positive, alpha-beta memory T cell
15
T-helper 17 cell
15
foreskin fibroblast
15
foreskin keratinocyte
14
endothelial cell of umbilical vein
14
hepatocyte
14
mononuclear cell
14
pancreatic ductal cell
14
trophoblast cell
13
fibroblast of lung
13
mammary epithelial cell
13
osteoblast
13
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic delta cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
skeletal muscle myoblast
11
CD4-positive, alpha-beta T cell
11
T-helper 2 cell
11
neutrophil
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
keratinocyte
10
neurosphere
10
pancreatic acinar cell
9
T cell
9
fibroblast of dermis
9
mature neutrophil
8
dermis blood vessel endothelial cell
8
pancreatic stellate cell
7
epithelial cell of prostate
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
7
mammary gland epithelial cell
7
retinal pigment epithelial cell
7
skeletal muscle satellite cell
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
astrocyte
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
mesenchymal stem cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
alternatively activated macrophage
5
erythroblast
5
foreskin melanocyte
5
hepatic stellate cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney glomerular epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
macrophage
5
memory B cell
5
mesangial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic endothelial cell
5
pancreatic polypeptide-secreting cell
5
renal cortical epithelial cell
5
skin fibroblast
5
smooth muscle cell
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
cardiac fibroblast
4
cardiac muscle cell
4
choroid plexus epithelial cell
4
dermis lymphatic vessel endothelial cell
4
fibroblast of peridontal ligament
4
gamma-delta T cell
4
glutamatergic neuron
4
inflammatory macrophage
4
iris pigment epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney epithelial cell
4
leukocyte
4
lung microvascular endothelial cell
4
nephron progenitor
4
non-pigmented ciliary epithelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle fiber
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Th1 cell
3
Th17 cell
3
adult endothelial progenitor cell
3
aortic endothelial cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
bone marrow cell
3
brain microvascular endothelial cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
epithelial cell of esophagus
3
erythroid cell
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mast cell
3
meso-epithelial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cell
3
neoplastic cell
3
pancreatic quiescent stellate cell
3
pericyte cell
3
peripheral blood stem cell
3
plasma cell
Organ
4
epithelium
4
kidney
Life stage
4
adult
Date released
3
February, 2021
1
August, 2021
Software used
4
r
1
seurat
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
annotation_type!
variant allelic effects
assembly!
GRCh38
month_released!
May, 2020
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR227UEA
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Connecting Tubule from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR986WOH
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Connecting Tubule from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR387PGT
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for kidney connecting tubule epithelial cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR643WPS
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Connecting Tubule from GSE121862 snDropSeq kidney regions (cortex and medulla)
Lab:
AMP-T2D consortium
Project:
AMP