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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
14
endothelial cell of hepatic sinusoid
10
hepatocyte
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
6
GM12878
6
H9
6
lymphocyte
6
olfactory receptor cell
6
pancreatic ductal cell
5
T-helper 1 cell
5
left cardiac atrium
5
regulatory T cell
4
CyT49
4
HUES8
4
T-helper 17 cell
4
endothelial cell
4
iPSC derived cell line
4
skeletal muscle fiber
3
adipocyte
3
hepatocyte(AFP)
3
mesenchymal stem cell
3
smooth muscle cell
3
type I muscle cell
3
type II muscle cell
2
HCT116
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
glial cell
2
leukocyte
2
neural cell
2
pancreatic acinar cell
2
pancreatic stellate cell
2
skeletal muscle satellite cell
1
B cell
1
B-1a B cell
1
CD4-positive helper T cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
Schwann cell
1
T-helper 2 cell
1
aorta wall
1
astrocyte
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
excitatory neuron
1
hippocampal neuron
1
islet of Langerhans
1
large intestine
1
liver
1
lower motor neuron
1
memory B cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pigmented layer of retina
1
preadipocyte
1
skeletal muscle
1
subcutaneous adipose tissue
1
tissue-resident macrophage
1
type B pancreatic cell
1
visceral abdominal adipose tissue
Organ
1
epithelium
1
pancreas
Life stage
1
adult
Date released
120
May, 2021
13
February, 2021
6
January, 2021
4
March, 2023
3
January, 2022
3
June, 2020
3
May, 2020
2
November, 2021
1
August, 2017
1
August, 2018
1
February, 2024
1
October, 2019
1
October, 2022
1
September, 2022
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
variant allelic effects
Showing 1 of 1 results
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Download
FileSet
DSR593VJK
released
Annotation file set
: pancreatic alpha cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP