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Schema
Citing CMDGA
Clear Filters
Annotation type
3
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
21
heart
20
brain
20
stomach
17
lung
16
kidney
16
muscle of arm
16
small intestine
15
adrenal gland
15
muscle of leg
15
placenta
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
right kidney
9
heart left ventricle
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
tibial nerve
8
body of pancreas
8
caudate nucleus
8
coronary artery
8
liver
8
spinal cord
8
substantia nigra
8
tibial artery
7
adipose tissue
7
ascending aorta
7
cerebellum
7
frontal cortex
7
putamen
7
right atrium auricular region
7
spleen
6
omental fat pad
5
Ammon's horn
5
amygdala
5
anterior cingulate cortex
5
heart right ventricle
5
hypothalamus
5
nucleus accumbens
5
ovary
5
right lobe of liver
5
sigmoid colon
5
subcutaneous adipose tissue
5
thyroid gland
5
transverse colon
4
C1 segment of cervical spinal cord
4
angular gyrus
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
layer of hippocampus
4
left ventricle myocardium
4
muscle of trunk
4
psoas muscle
4
retina
4
skin of body
4
temporal lobe
4
testis
3
Peyer's patch
3
chorion membrane
3
esophagus
3
esophagus muscularis mucosa
3
islet of Langerhans
3
pancreas
3
prostate gland
3
right cardiac atrium
3
skeletal muscle tissue
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
Brodmann (1909) area 46
2
breast epithelium
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus squamous epithelium
2
eye
2
germinal matrix
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
parathyroid adenoma
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
tongue
2
trophoblast
2
urinary bladder
2
uterus
1
abdominal aorta artery
1
amnion
1
arm bone
1
breast
1
cerebellar cortex
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
embryonic facial prominence
1
esophagus mucosa
1
femur
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
inferior parietal cortex
1
left cardiac atrium
1
leg bone
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mucosa of stomach
1
occipital lobe
1
pituitary gland
1
pons
1
rectum smooth muscle tissue
1
superior temporal gyrus
1
umbilical cord
1
visceral abdominal adipose tissue
Organ
3
musculature of body
Life stage
2
adult
1
unknown
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
variant to gene
files.file_type!
bed bed3+
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR305GKV
released
Annotation file set
: Chromatin states for BSS01581 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR313TBW
released
Annotation file set
: Chromatin states for BSS01578 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR643OAO
released
Annotation file set
: Chromatin states for BSS01577 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP