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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
eQTL
5
gene expression
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
differential activity
Annotation Category
3
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
3
RNA-seq
2
ATAC-seq
Available data
3
tsv
2
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
23
retina
20
pigmented layer of retina
10
kidney
6
coronary artery
6
islet of Langerhans
6
right atrium auricular region
6
tibial artery
6
tibial nerve
5
Ammon's horn
5
caudate nucleus
5
frontal cortex
5
heart
5
omental fat pad
5
pancreas
5
putamen
5
subcutaneous adipose tissue
4
ascending aorta
4
cerebellum
4
liver
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
body of pancreas
3
cerebellum (Hemisphere)
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
gastrocnemius medialis(Muscle - Skeletal)
3
heart left ventricle
3
hypothalamus
3
left ventricle myocardium
3
nucleus accumbens
3
right lobe of liver
3
stomach
3
substantia nigra
2
adipose tissue
2
brain
2
globus pallidus
2
muscle of leg
2
occipital lobe
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
renal pelvis
2
spleen
2
superior temporal gyrus
1
hindlimb muscle
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
breast epithelium
1
cerebellar cortex
1
chorion membrane
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
endothelial cell
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
large intestine
1
left cardiac atrium
1
left renal pelvis
1
limb
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
placenta
1
prefrontal cortex
1
prostate gland
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
renal cortex interstitium
1
renal cortex tubule
1
right lung
1
right renal pelvis
1
sigmoid colon
1
small intestine
1
spinal cord
1
testis
1
thoracic aorta
1
thymus
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
uterus
Organ
5
adipose tissue
5
connective tissue
Life stage
4
adult
Date released
3
March, 2020
1
January, 2020
1
September, 2018
Software used
2
macs
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
assembly!
hg18
month_released!
May, 2020
Showing 5 of 5 results
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Download
FileSet
DSR329VXM
released
Annotation file set
: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR382TAD
released
Annotation file set
: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337DSV
released
Annotation file set
: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR978YHK
released
Annotation file set
: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP