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Schema
Citing CMDGA
Clear Filters
Annotation type
25
accessible chromatin
14
target gene predictions
12
gene expression
4
variant allelic effects
3
caQTL
2
binding sites
2
candidate regulatory elements
2
eQTL
1
chromatin state
1
histone modifications
0
Fine-mapped variants
Annotation Category
3
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
coronary artery
3
Ammon's horn
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
ascending aorta
3
body of pancreas
3
caudate nucleus
3
cerebellum
3
cerebellum (Hemisphere)
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
frontal cortex
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
left ventricle myocardium
3
nucleus accumbens
3
omental fat pad
3
putamen
3
right atrium auricular region
3
right lobe of liver
3
subcutaneous adipose tissue
3
substantia nigra
3
tibial artery
3
tibial nerve
2
CD4-positive helper T cell
2
endothelial cell
2
islet of Langerhans
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
epithelium
Date released
2
October, 2022
1
February, 2023
Software used
3
rasqual
2
eigenmt
Lab
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
RFA
2
AMP2
1
AMP
organ_slims!
small intestine
Showing 3 of 3 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP