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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
0
Fine-mapped variants
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
40
stomach
37
heart
33
lung
33
muscle of arm
29
brain
29
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
renal cortex interstitium
20
right kidney
20
thymus
19
hematopoietic multipotent progenitor cell
19
renal pelvis
18
left kidney
15
spleen
14
B cell
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
13
liver
11
body of pancreas
11
foreskin keratinocyte
11
heart left ventricle
10
sigmoid colon
9
MCF-7
9
tibial nerve
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
caudate nucleus
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
omental fat pad
8
ovary
8
substantia nigra
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
Peyer's patch
7
adipose tissue
7
ascending aorta
7
endocrine pancreas
7
foreskin fibroblast
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
testis
7
upper lobe of left lung
6
T-helper 1 cell
6
cardiac muscle cell
6
cerebellum
6
coronary artery
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
heart right ventricle
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
natural killer cell
6
retina
6
right atrium auricular region
6
right renal pelvis
6
skeletal muscle tissue
6
tibial artery
5
Ammon's horn
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
esophagus muscularis mucosa
5
frontal cortex
5
gastroesophageal sphincter
5
neural progenitor cell
5
pancreas
5
parathyroid adenoma
5
putamen
5
regulatory T cell
5
right lobe of liver
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
subcutaneous adipose tissue
5
temporal lobe
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T cell
4
T-cell
4
adipocyte
4
angular gyrus
4
aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of prostate
4
esophagus
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle myoblast
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
C1 segment of cervical spinal cord
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
amygdala
3
anterior cingulate cortex
3
cardiac fibroblast
3
cerebellum (Hemisphere)
3
chorion membrane
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
gastrocnemius medialis(Muscle - Skeletal)
3
hepatocyte
3
hypothalamus
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney tubule cell
3
left ventricle myocardium
3
limb
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
neural cell
3
nucleus accumbens
3
suprapubic skin
3
urinary bladder
3
uterus
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
Brodmann (1909) area 46
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
eye
organ_slims!
thyroid gland
Showing 2 of 2 results
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Download
FileSet
DSR972EHM
released
Annotation file set
: Candidate regulatory elements for BSS00182 CD1c-positive myeloid dendritic cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229AHG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD1c-positive myeloid dendritic cell
Lab:
AMP-T2D consortium
Project:
AMP