Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
23
accessible chromatin
6
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
binding sites
1
eQTL
1
gene expression
1
histone modifications
0
Fine-mapped variants
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
20
heart
19
stomach
18
A549
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
K562
7
body of pancreas
7
caudate nucleus
7
mature neutrophil
7
spinal cord
6
adipocyte
6
adipose tissue
6
ascending aorta
6
coronary artery
6
left cardiac atrium
6
mononuclear cell
6
spleen
6
substantia nigra
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
cerebellum
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
frontal cortex
5
heart right ventricle
5
islet of Langerhans
5
omental fat pad
5
right atrium auricular region
5
sigmoid colon
5
temporal lobe
5
tibial artery
5
trophoblast cell
4
Ammon's horn
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
chorionic villus
4
endocrine pancreas
4
fibroblast of lung
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
putamen
4
right lobe of liver
4
subcutaneous adipose tissue
4
thyroid gland
4
transverse colon
3
C1 segment of cervical spinal cord
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
amygdala
3
anterior cingulate cortex
3
cerebellum (Hemisphere)
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
duodenal mucosa
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
left ventricle myocardium
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
natural killer cell
3
neurosphere
3
nucleus accumbens
3
pancreas
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
stomach smooth muscle
3
testis
3
thoracic aorta
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
breast epithelium
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
germinal matrix
2
hepatocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
skin fibroblast
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DG-75 cell
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
Organ
3
eye
Life stage
3
embryonic
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
breast epithelium
month_released!
May, 2020
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR764IKI
released
Annotation file set
: Chromatin states for BSS01504 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR034BAL
released
Annotation file set
: Chromatin states for BSS01503 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR883QBG
released
Annotation file set
: Chromatin states for BSS01502 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP