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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
2
target gene predictions
1
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
3
Genetic variant effects
2
Target gene links
Annotation type Category
3
RNA-seq
2
ChIP-seq
2
DNase-seq
Available data
3
tsv
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
21
stomach
20
heart
17
adrenal gland
17
lung
17
small intestine
16
brain
16
muscle of arm
15
placenta
14
kidney
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
11
right lung
10
liver
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
adipose tissue
8
body of pancreas
8
psoas muscle
8
spinal cord
8
spleen
7
heart left ventricle
7
sigmoid colon
6
caudate nucleus
6
coronary artery
6
ovary
6
tibial nerve
5
Ammon's horn
5
ascending aorta
5
cerebellum
5
frontal cortex
5
gastrocnemius medialis
5
heart right ventricle
5
muscle of trunk
5
omental fat pad
5
pancreas
5
right atrium auricular region
5
substantia nigra
5
thyroid gland
5
tibial artery
5
transverse colon
4
aorta
4
chorionic villus
4
endocrine pancreas
4
putamen
4
right lobe of liver
3
C1 segment of cervical spinal cord
3
Peyer's patch
3
amygdala
3
anterior cingulate cortex
3
breast epithelium
3
cerebellum (Hemisphere)
3
chorion membrane
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
esophagus
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
islet of Langerhans
3
layer of hippocampus
3
left ventricle myocardium
3
nucleus accumbens
3
retina
3
skeletal muscle tissue
3
subcutaneous adipose tissue
3
testis
3
trophoblast
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
angular gyrus
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
parathyroid adenoma
2
prostate gland
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
temporal lobe
2
thoracic aorta
2
tongue
2
urinary bladder
2
uterus
2
vagina
1
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
cerebellar cortex
1
dorsolateral prefrontal cortex
1
embryonic facial prominence
1
femur
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
inferior parietal cortex
1
left cardiac atrium
1
leg bone
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
occipital lobe
1
pons
1
rectum smooth muscle tissue
1
skin of body
1
superior temporal gyrus
1
umbilical cord
1
white adipose tissue
Organ
5
blood vessel
5
vasculature
Life stage
5
adult
Date released
3
March, 2020
2
September, 2022
Software used
2
r
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
assembly!
hg18
Showing 5 of 5 results
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Download
FileSet
DSR600PCT
released
Annotation file set
: Target gene predictions for BSS00088 ascending aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR897NGX
released
Annotation file set
: Target gene predictions for BSS00087 ascending aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR323HMN
released
Annotation file set
: Fine-mapping results from DAPG of ascending aorta for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR415UNN
released
Annotation file set
: Fine-mapping results from CAVIAR of ascending aorta for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011ZCI
released
Annotation file set
: Fine-mapping results from CaVEMaN of ascending aorta for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP