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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
accessible chromatin
4
target gene predictions
3
Fine-mapped variants
2
eQTL
2
gene expression
2
histone modifications
2
variant allelic effects
Annotation Category
5
Genetic variant effects
Annotation type Category
3
RNA-seq
2
DNase-seq
Available data
3
tsv
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
coronary artery
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
ascending aorta
4
body of pancreas
4
caudate nucleus
4
cerebellum (Hemisphere)
4
frontal cortex
4
putamen
4
subcutaneous adipose tissue
3
Ammon's horn
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
cerebellum
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
islet of Langerhans
3
left ventricle myocardium
3
nucleus accumbens
3
omental fat pad
3
right lobe of liver
3
substantia nigra
2
muscle of leg
2
heart
2
heart left ventricle
hindlimb muscle
1
left kidney
1
omental fat pad
1
adipose tissue
1
brain
1
globus pallidus
1
heart right ventricle
1
kidney
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
occipital lobe
1
pancreas
1
pons
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
superior temporal gyrus
1
thoracic aorta
Organ
4
brain
Life stage
4
adult
Date released
3
March, 2020
2
May, 2020
Software used
2
deltasvm
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
hindlimb muscle
Showing 5 of 5 results
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Download
FileSet
DSR024MBT
released
Annotation file set
: Variant allelic effects of caudate nucleus ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024XWE
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain occipital lobe DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR032CRB
released
Annotation file set
: Fine-mapping results from DAPG of caudate nucleus for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259XOJ
released
Annotation file set
: Fine-mapping results from CAVIAR of caudate nucleus for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR517HZI
released
Annotation file set
: Fine-mapping results from CaVEMaN of caudate nucleus for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP