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Schema
Citing CMDGA
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Annotation type
5
gene expression
3
accessible chromatin
2
candidate regulatory elements
1
target gene predictions
1
variant allelic effects
0
Fine-mapped variants
Annotation Category
1
Genetic variant effects
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
6
fibroblast
5
right atrium auricular region
5
tibial nerve
4
body of pancreas
4
caudate nucleus
4
cerebellum (Hemisphere)
4
frontal cortex
4
putamen
4
subcutaneous adipose tissue
3
Ammon's horn
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
cerebellum
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
enterocyte
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
islet of Langerhans
3
left ventricle myocardium
3
macrophage
3
myofibroblast cell
3
nucleus accumbens
3
omental fat pad
3
right lobe of liver
3
substantia nigra
2
cardiac fibroblast
2
muscle of leg
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T cell
2
basal cell
2
cardiac muscle cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
heart
2
heart left ventricle
2
hepatocyte
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
adipose tissue
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain
1
brain pericyte
1
bronchial goblet cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
epithelial cell of proximal tubule
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
hepatic stellate cell
1
keratinocyte
1
kidney
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
medulla oblongata
1
mesothelial cell
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
naive t cell
1
occipital lobe
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
pons
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
superior temporal gyrus
1
thyroid follicular cell
1
type II pneumocyte
Organ
1
epithelium
1
kidney
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
files.file_type!
bed bed9
organ_slims!
blood vessel
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR372RJW
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney podocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP