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Citing CMDGA
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Annotation type
6
eQTL
5
gene expression
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
differential activity
1
variant allelic effects
Annotation Category
4
Genetic variant effects
Annotation type Category
3
RNA-seq
1
ATAC-seq
Available data
3
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
6
fibroblast
4
subcutaneous adipose tissue
3
omental fat pad
3
right lobe of liver
2
cardiac fibroblast
2
hepatocyte
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
adipocyte
1
adipose tissue
1
brain pericyte
1
hepatic stellate cell
Organ
4
adipose tissue
4
connective tissue
0
liver
Life stage
3
adult
Date released
3
March, 2020
1
May, 2020
Software used
1
deltasvm
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329VXM
released
Annotation file set
: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR382TAD
released
Annotation file set
: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337DSV
released
Annotation file set
: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP