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Annotation type
8
eQTL
6
gene expression
4
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
2
differential activity
1
chromatin state
1
variant allelic effects
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
4
RNA-seq
Available data
4
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
subcutaneous adipose tissue
3
Ammon's horn
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
ascending aorta
3
body of pancreas
3
caudate nucleus
3
cerebellum
3
cerebellum (Hemisphere)
3
coronary artery
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
frontal cortex
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
left ventricle myocardium
3
nucleus accumbens
3
omental fat pad
3
putamen
3
right atrium auricular region
3
right lobe of liver
3
substantia nigra
3
tibial artery
3
tibial nerve
2
blood serum
2
islet of Langerhans
1
aorta wall
1
foam cell
1
internal thoracic artery
1
liver
1
macrophage
1
skeletal muscle
1
visceral fat
Organ
4
adipose tissue
4
connective tissue
Life stage
4
adult
Date released
3
March, 2020
1
March, 2025
Software used
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
3
T2DKP
3
GTEx
1
STARNET
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR697QDJ
released
Annotation file set
: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329VXM
released
Annotation file set
: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR382TAD
released
Annotation file set
: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337DSV
released
Annotation file set
: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP