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Clear Filters
Annotation type
  • 88accessible chromatin
  • 88candidate regulatory elements
  • 78target gene predictions
  • 51gene expression
  • 48chromatin state
  • 31binding sites
  • 25eQTL
  • 25histone modifications
  • 16differential activity
  • 16variant allelic effects
  • 8Fine-mapped variants
  • 2caQTL
  • 2pQTL
  • 2sQTL
Annotation Category
  • 6Genetic variant effects
  • 2cis-regulatory elements
Annotation type Category
  • 8RNA-seq
Available data
  • 8tsv
File set status
  • 8released
Genome assembly (visualization)
  • 6GRCh38
  • 6hg19
Organism
  • 8Homo sapiens
Biosample type
  • 8tissue
Biosample term
  • 4subcutaneous adipose tissue
  • 3omental fat pad
  • 1visceral fat
Organ
  • 36brain
  • 11blood vessel
  • 11vasculature
  • 9heart
  • 9limb
  • 8adipose tissue
  • 8connective tissue
  • 7artery
  • 7musculature of body
  • 5pancreas
  • 4liver
  • 3nerve
  • 3spinal cord
  • 2blood
  • 2bodily fluid
Life stage
  • 8adult
Date released
  • 6March, 2020
  • 2March, 2025
Software used
  • 2gtex_finemapping_eQTL:caveman
  • 2gtex_finemapping_eQTL:caviar
  • 2gtex_finemapping_eQTL:dapg
  • 2qTLtools
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 6 T2DKP
  • 6GTEx
  • 2STARNET
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR307DUL

    released

    Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in visceral fat
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR697QDJ

    released

    Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR662NBO

    released

    Annotation file set: Fine-mapping results from DAPG of omental fat pad for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR329VXM

    released

    Annotation file set: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR696VGJ

    released

    Annotation file set: Fine-mapping results from CAVIAR of omental fat pad for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR382TAD

    released

    Annotation file set: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR517MNX

    released

    Annotation file set: Fine-mapping results from CaVEMaN of omental fat pad for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR337DSV

    released

    Annotation file set: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
    Lab: AMP-T2D consortium
    Project: AMP
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