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Schema
Citing CMDGA
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Annotation type
22
gene expression
2
accessible chromatin
2
candidate regulatory elements
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
1
epithelial cell of proximal tubule
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
Organ
2
kidney
1
epithelium
Life stage
1
adult
Date released
1
August, 2021
1
January, 2020
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
annotation_type!
binding sites
Showing 2 of 2 results
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Download
FileSet
DSR795NZZ
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Stroma cells
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR184YBQ
released
Annotation file set
: Accessible chromatin annotation of kidney epithelial cell of proximal tubule from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP