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Citing CMDGA
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Annotation type
8
target gene predictions
candidate regulatory elements
6
chromatin state
4
eQTL
3
gene expression
2
accessible chromatin
1
binding sites
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
6
endothelial cell of hepatic sinusoid
3
cardiac fibroblast
3
coronary artery
3
endothelial cell of lymphatic vessel
3
tibial artery
3
tibial nerve
2
adipose tissue
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
muscle of leg
2
omental fat pad
2
subcutaneous adipose tissue
1
hindlimb muscle
1
GM23248
1
adipose-derived mesenchymal stem cell
1
ascending aorta
1
brain microvascular endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of pulmonary artery
1
forelimb muscle
1
gastrocnemius medialis
1
kidney capillary endothelial cell
1
limb
1
muscle of arm
1
placental villus capillary endothelial cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
thoracic aorta
Organ
2
adipose tissue
2
connective tissue
0
limb
0
vasculature
Date released
1
January, 2020
1
November, 2022
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
candidate regulatory elements
Showing 2 of 2 results
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FileSet
DSR315TSA
released
Annotation file set
: Accessible chromatin of subcutaneous adipose tissue of 11 out of 17 individuals to generate chromatin accessibility profiles
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849UDT
released
Annotation file set
: Adipose subcutaneous accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP