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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
1
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
5
hepatocyte
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
2
endothelial cell
2
fibroblast
2
pancreatic alpha cell
2
pancreatic beta cell
1
cardiac fibroblast
1
T cell
1
gabaergic neuron
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
kidney distal convoluted tubule epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
microglial cell/astrocyte
1
neuron
1
non-neuronal cell
1
oligodendrocyte
1
osteoblast
1
pancreatic acinar cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
smooth muscle cell
Life stage
4
adult
Date released
4
November, 2022
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
meQTL
Showing 4 of 4 results
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FileSet
DSR936UDZ
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from primary visual cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223FVD
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from dorsolateral prefrontal cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR357LJU
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from anterior cingulate cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR341UVB
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP