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Citing CMDGA
Clear Filters
Annotation type
833
chromatin state
603
gene expression
162
differential activity
156
eQTL
68
Fine-mapped variants
16
variant allelic effects
4
accessible chromatin
4
sQTL
2
hQTL
2
variant to gene
1
histone modifications
meQTL
1
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ATAC-seq
1
DNase-seq
Available data
bed bed3+
486
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
File set status
4
released
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
primary cell
Biosample term
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
glomerular endothelial cell
1
neuron cell of Hypothalamus (neuron)
Organ
1
epithelium
1
kidney
Date released
February, 2024
3
November, 2022
1
June, 2020
Software used
4
macs
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Project
4
AMP
RFA
3
AMP2
1
AMP
annotation_type!
meQTL
files.file_type!
bed bed3+
month_released!
February, 2024
organ_slims!
musculature of body
Showing 4 of 4 results
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FileSet
DSR593BUS
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Neuron).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR817DDX
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Progenitor).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR885BSZ
released
Annotation file set
: Accessible chromatin annotation for Kidney HRGEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP